```bash
#!/bin/bash
scriptpath=`pwd`
for file in $scriptpath/rinex/* ;do
filename=`echo $file | awk -F/ '{print $NF}'`
SITENAME=`echo $filename | awk -F_ '{print $1}'`
YEAR=$(echo $filename | awk -F_ '{string=substr($3,1,4); print string}')
DOY=$(echo $filename | awk -F_ '{string=substr($3,5,3); print string}')
file=`awk -v YEAR=$YEAR -v DOY=$DOY 'BEGIN {printf"BRDM00DLR_S_%s%s0000_01D_MN.rnx",YEAR,DOY}'`
anubis -- thin :inp:rinexo $scriptpath/rinex/$filename :out:log $SITENAME$YEAR$DOY.log
anubis -- sum :inp:rinexo $scriptpath/rinex/$filename :inp:rinexn $scriptpath/brdm/$file :out:xtr $SITENAME$YEAR$DOY.xtr
cp $SITENAME$YEAR$DOY.xtr $scriptpath/plot_Anubis
$scriptpath/plot_Anubis/plot_Anubis.pl --ifile $SITENAME$YEAR$DOY.xtr --plot="$SITENAME$YEAR$DOY" --all --all --title="$SITENAME [$YEAR:$DOY]"
mkdir -p $scriptpath/$YEAR/$DOY/$SITENAME
echo "$SITENAME $YEAR $DOY" >> $scriptpath/$YEAR/$DOY/$YEAR$DOY.txt
sed -n '/SUM/p' $SITENAME$YEAR$DOY.xtr >> $scriptpath/$YEAR/$DOY/$YEAR$DOY.txt
echo "..........................." >> $scriptpath/$YEAR/$DOY/$YEAR$DOY.txt
echo "" >> $scriptpath/$YEAR/$DOY/$YEAR$DOY.txt
mv $SITENAME$YEAR$DOY* $scriptpath/$YEAR/$DOY/$SITENAME
echo "$YEAR\t$DOY\t$SITENAME " >> logfile
done