3DSlicer之Python脚本储存库代码实验: 应用vtkCellLocator定位最近点的cellID

最新推荐文章于 2023-08-17 21:30:00 发布

Jumbo Jing

最新推荐文章于 2023-08-17 21:30:00 发布

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分类专栏： 3DSlicer 文章标签： python

本文链接：https://blog.csdn.net/sinat_21835983/article/details/126277114

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缘起

在前面应用连通过滤器vtk.vtkConnectivityFilter()时, 我只用了最近点连通SetExtractionModeToClosestPointRegion, 最大区域连通SetExtractionModeToLargestRegion 和全部连通SetExtractionModeToAllRegions3种方式, 其中还有细胞种子连通SetExtractionModeToCellSeededRegions, 这个方法可以连接多个cellID, 这就是下面的探索:

探索: 应用vtkCellLocator定位最近点的cellID

源代码:

# Get input nodes 输入节点的获取
modelNode = slicer.util.getNode("Segment_1") # select cells in this model 选模型
pointListNode = slicer.util.getNode("F") # points will be selected at positions specified by this markups point list node 定位点

# Create scalar array that will store selection state
# 创建数组以储存选择状态 
cellScalars = modelNode.GetMesh().GetCellData()
selectionArray = cellScalars.GetArray("selection")
if not selectionArray:
  selectionArray = vtk.vtkIntArray()
  selectionArray.SetName("selection")
  selectionArray.SetNumberOfValues(modelNode.GetMesh().GetNumberOfCells())
  selectionArray.Fill(0)
  cellScalars.AddArray(selectionArray)

# Set up coloring by selection array 设置颜色
modelNode.GetDisplayNode().SetActiveScalar("selection", vtk.vtkAssignAttribute.CELL_DATA)
modelNode.GetDisplayNode().SetAndObserveColorNodeID("vtkMRMLColorTableNodeWarm1")
modelNode.GetDisplayNode().SetScalarVisibility(True)

# Initialize cell locator 初始化细胞定位器
cell = vtk.vtkCellLocator()
cell.SetDataSet(modelNode.GetMesh())
cell.BuildLocator()

def onPointsModified(observer=None, eventid=None):
  """点调整函数
  """
  global pointListNode, selectionArray
  selectionArray.Fill(0) # set all cells to non-selected by default 设置细胞静默(默认)
  markupPoints = slicer.util.arrayFromMarkupsControlPoints(pointListNode)
  closestPoint = [0.0, 0.0, 0.0]
  cellObj = vtk.vtkGenericCell()
  cellId = vtk.mutable(0)
  subId = vtk.mutable(0)
  dist2 = vtk.mutable(0.0)
  for markupPoint in markupPoints:
    cell.FindClosestPoint(markupPoint, closestPoint, cellObj, cellId, subId, dist2)
    closestCell = cellId.get()
    if closestCell >=0:
      selectionArray.SetValue(closestCell, 100) # set selected cell's scalar value to non-zero 激活细胞
  selectionArray.Modified()

# Initial update 更新
onPointsModified()
# Automatic update each time when a markup point is modified
# 随马克点的变化自动更新
pointListNodeObserverTag = markupsNode.AddObserver(slicer.vtkMRMLMarkupsFiducialNode.PointModifiedEvent, onPointsModified)

# To stop updating selection, run this: 停止更新,👇润
# pointListNode.RemoveObserver(pointListNodeObserverTag),