linux安装r过程,linux安装R记录

代码

(base) vip279@VM-0-15-ubuntu:~$ cd data/

(base) vip279@VM-0-15-ubuntu:~/data$ r

Command 'r' not found, but can be installed with:

apt install r-cran-littler

Please ask your administrator.

(base) vip279@VM-0-15-ubuntu:~/data$ cd

(base) vip279@VM-0-15-ubuntu:~$ r

Command 'r' not found, but can be installed with:

apt install r-cran-littler

Please ask your administrator.

(base) vip279@VM-0-15-ubuntu:~$ apt install r-cran-littler

E: Could not open lock file /var/lib/dpkg/lock-frontend - open (13: Permission denied)

E: Unable to acquire the dpkg frontend lock (/var/lib/dpkg/lock-frontend), are you root?

(base) vip279@VM-0-15-ubuntu:~$ conda install r

下为过程

Collecting package metadata (current_repodata.json): done

Solving environment: /

Warning: >10 possible package resolutions (only showing differing packages):

- https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0

- https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0

- https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0

- https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0

- https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015, https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0

- https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015, https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0

- https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015

- https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015

- https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015

- https://mirrors.bfsu.edu.cn/anaconda/cloud/bioconda/noarch::fastqc-0.11.9-0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::libiconv-1.16-h516909a_0, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/linux-64::openjdk-10.0.2-h14c3975_1015, https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0

... and othedone

## Package Plan ##

environment location: /data/home/vip279/miniconda3

added / updated specs:

- r

The following packages will be downloaded:

package | build

---------------------------|-----------------

_libgcc_mutex-0.1 | conda_forge 3 KB https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge

_openmp_mutex-4.5 | 1_gnu 22 KB https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge

_r-mutex-1.0.1 | anacondar_1 3 KB https://mirrors.bfsu.edu.cn/anaconda/cloud/conda-forge

binutils_impl_linux-64-2.31.1| h6176602_1 3.9 MB https://mirrors.bfsu.edu.cn/anaconda/pkgs/main

binutils_linux-64-2.31.1 | h6176602_9 26 KB https://mirrors.bfsu.edu.cn/anaconda/pkgs/main

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