Image registration
The purpose of this repository is to provide an overview of github repositories on non-parametric image registration.
All our code is written in python using PyTorch except for our original deep-learning registration work [Yang16] which is written in lua using torch.
Mermaid: iMagE Registration via autoMAtIc Differentiation
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Mermaid is a registration toolkit making use of automatic differentiation for rapid prototyping. It includes various image registration models. In particular, stationary velocity field models (both based on velocity fields and momentum fields), scalar vector momentum Large Displacement Diffeomorphic Metric Mapping (LDDMM) models as well as the more generalized Region-specific Diffeomorphic Metric Mapping model (RDMM).
The Mermaid repository can be found here: https://github.com/uncbiag/mermaid
Supported transformation models:
affine_map: map-based affine registration
diffusion_map: displacement-based diffusion registration
curvature_map: displacement-based curvature registration
total_variation_map: displacement-based total variation regis