因为github上的SoftPosit算法需要用到armadillo库,所以最近就在Ubuntu20.04上安装了一个armadillo库,在使用该库后,编译程序时,出现了类似于以下的问题:
/usr/bin/ld: warning: libhdf5.so.103, needed by /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so, not found (try using -rpath or -rpath-link)
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Fopen'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_INT_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5check_version'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Ovisit'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Ldelete'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Dget_space'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Gcreate2'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Eget_auto2'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_LLONG_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Tinsert'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_SHORT_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Dread'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_UCHAR_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Tequal'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Sget_simple_extent_ndims'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Fis_hdf5'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Fcreate'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Screate_simple'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_DOUBLE_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Sget_simple_extent_dims'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Lexists'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Dopen2'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Tcopy'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Dget_type'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_ULLONG_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_UINT_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_FLOAT_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Eset_auto2'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_LONG_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Sclose'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5open'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Tclose'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_SCHAR_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Gopen2'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_USHORT_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Dwrite'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Dclose'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Tcreate'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5T_NATIVE_ULONG_g'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Fclose'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Gclose'
/usr/bin/ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../../lib/libarmadillo.so: undefined reference to `H5Dcreate2'
collect2: error: ld returned 1 exit status
make[2]: *** [CMakeFiles/softpositdemo.dir/build.make:84: softpositdemo] Error 1
make[1]: *** [CMakeFiles/Makefile2:76: CMakeFiles/softpositdemo.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
*** Failure: Exit code 2 ***
反映是找不到libhdf5.so.103库,根据下面这个博客,我们应该要安装hdf5这个库
但是在最新版hdf5安装完后,发现问题仍然没有解决,在尝试了很久之后,我通过以下操作解决问题:
1. 进入hdf5最后安装后的目录,比如我的hdf5目录在/usr/local/hdf5,将lib目录中的libhdf5.so、libhdf5.so.10、libhdf5.so.10.x.0这几个文件复制到libarmadillo.so所在的目录。
2. 这一步非常关键,将libhdf5.so.10改名为libhdf5.so.103
改名后,程序顺利运行