fasta库导入报错：ImportError: cannot import name XX from ‘fasta‘

解决方案：

将fasta库替换为pyfaidx库

报错示例如下：

Traceback (most recent call last):
  File "/mnt/raid60/analysis_ONT/user/software/TranscriptClean-master/TranscriptClean.py", line 19, in <module>
    from pyfasta import Fasta
  File "/home/user/miniconda3/envs/afenv/lib/python3.9/site-packages/pyfasta/__init__.py", line 3, in <module>
    from fasta import complement
ImportError: cannot import name 'complement' from 'fasta' (/home/user/miniconda3/envs/afenv/lib/python3.9/site-packages/fasta/__init__.py)

针对上面的报错，修改指定路径文件中第三行的 from fasta import complement代码为from pyfaidx import complement。

根据报错提示，这里的文件路径是：/home/user/miniconda3/envs/afenv/lib/python3.9/site-packages/fasta/__init__.py