ITK学习——ITK编程步骤

 

ITK编程步骤

使用 ITK, CMake联合进行编程, 基本过程如下:

一、建立文件夹 D:/ITK/test/src, D:/ITK/test/bin, src 用来存放源程序, bin 为程序编译目标.

二、如下以图像配准的Hello World为例.

1. 建立 D:/ITK/test/src/ImageRegistration1, D:/ITK/test/bin/ImageRegistration1

2. 在D:/ITK/test/src/ImageRegistration1目录中,新建文件ImageRegistration1.cxx,编写源代码. 新建文件 CMakeLists.txt, 用于 CMake 进行配置.

3. ImageRegistration1.cxx:

  

/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/

//  Software Guide : BeginCommandLineArgs
//    INPUTS:  {BrainProtonDensitySliceBorder20.png}
//    INPUTS:  {BrainProtonDensitySliceShifted13x17y.png}
//    OUTPUTS: {ImageRegistration1Output.png}
//    OUTPUTS: {ImageRegistration1DifferenceAfter.png}
//    OUTPUTS: {ImageRegistration1DifferenceBefore.png}
//  Software Guide : EndCommandLineArgs

// Software Guide : BeginLatex
//
// This example illustrates the use of the image registration framework in
// Insight.  It should be read as a "Hello World" for ITK registration. Which
// means that for now, you don't ask ``why?''. Instead, use the example as an
// introduction to the elements that are typically involved in solving an image
// registration problem.
//
// \index{itk::Image!Instantiation}
// \index{itk::Image!Header}
//
// A registration method requires the following set of components: two input
// images, a transform, a metric, an interpolator and an optimizer. Some of
// these components are parameterized by the image type for which the
// registration is intended.  The following header files provide declarations
// of common types used for these components.
//
// Software Guide : EndLatex


// Software Guide : BeginCodeSnippet
#include "itkImageRegistrationMethod.h"
#include "itkTranslationTransform.h"
#include "itkMeanSquaresImageToImageMetric.h"
#include "itkRegularStepGradientDescentOptimizer.h"
// Software Guide : EndCodeSnippet


#include "itkImageFileReader.h"
#include "itkImageFileWriter.h"

#include "itkResampleImageFilter.h"
#include "itkCastImageFilter.h"
#include "itkRescaleIntensityImageFilter.h"
#include "itkSubtractImageFilter.h"



class CommandIterationUpdate : public itk::Command
{
public:
  typedef  CommandIterationUpdate   Self;
  typedef  itk::Command             Superclass;
  typedef itk::SmartPointer<Self>  Pointer;
  itkNewMacro( Self );

protected:
  CommandIterationUpdate() {};

public:

  typedef itk::RegularStepGradientDescentOptimizer     OptimizerType;
  typedef const OptimizerType                         *OptimizerPointer;

  void Execute(itk::Object *caller, const itk::EventObject & event)
  {
    Execute( (const itk::Object *)caller, event);
  }

  void Execute(const itk::Object * object, const itk::EventObject & event)
  {
    OptimizerPointer optimizer =
                         dynamic_cast< OptimizerPointer >( object );

    if( ! itk::IterationEvent().CheckEvent( &event ) )
      {
      return;
      }

    std::cout << optimizer->GetCurrentIteration() << " = ";
    std::cout << optimizer->GetValue() << " : ";
    std::cout << optimizer->GetCurrentPosition() << std::endl;
  }

};


int main( int argc, char *argv[] )
{
  if( argc < 4 )
    {
    std::cerr << "Missing Parameters " << std::endl;
    std::cerr << "Usage: " << argv[0];
    std::cerr << " fixedImageFile  movingImageFile ";
    std::cerr << "outputImagefile [differenceImageAfter]";
    std::cerr << "[differenceImageBefore]" << std::endl;
    return EXIT_FAILURE;
    }


  // Software Guide : BeginLatex
  //
  // The types of each one of the components in the registration methods should
  // be instantiated first. With that purpose, we start by selecting the image
  // dimension and the type used for representing image pixels.
  //
  // Software Guide : EndLatex

  // Software Guide : BeginCodeSnippet
  const    unsigned int    Dimension = 2;
  typedef  float           PixelType;
  // Software Guide : EndCodeSnippet


  //  Software Guide : BeginLatex
  //
  //  The types of the input images are instantiated by the following lines.
  //
  //  Software Guide : EndLatex

  // Software Guide : BeginCodeSnippet
  typedef itk::Image< PixelType, Dimension >  FixedImageType;
  typedef itk::Image< PixelType, Dimension >  MovingImageType;
  // Software Guide : EndCodeSnippet


  //  Software Guide : BeginLatex
  //
  //  The transform that will map the fixed image space into the moving image
  //  space is defined below.
  //
  //  Software Guide : EndLatex

  // Software Guide : BeginCodeSnippet
  typedef itk::TranslationTransform< double, Dimension > TransformType;
  // Software Guide : EndCodeSnippet


  //  Software Guide : BeginLatex
  //
  //  An optimizer is required to explore the parameter space of the transform
  //  in se