LoRDEC: a hybrid error correction program for long, PacBio reads

转载 2015年07月07日 11:02:55


http://www.atgc-montpellier.fr/lordec/


L. Salmela and E. Rivals

LoRDEC: accurate and efficient long read error correction


Source code

We provide the source code, which is available in the following archive


To compile it you will need to fetch the GATB core library (see below).


Installation


Please consult the README file (text format) available in the source archive.
LoRDEC needs the GATB core library (currently in version gatb-core-1.0.5-Linux.tar.gz)


For installing, please download, go in the desired directory, and in a shell type:
  • tar xzvf LoRDEC-0.4.1.tar.gz
  • make

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