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LinzyLee
生信在读博士
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Seurat包AddModuleScore用在bulk RNA-seq数据
代码改的比较粗糙,自用。AddModuleScore_bulk <- function (object, features, nbin = 24, ctrl = 100, k = FALSE, name = "Cluster", seed = 2022) { set.seed(seed = 2022) features <- lapply(X = features, FUN = function(x) {.原创 2022-02-26 13:25:50 · 1885 阅读 · 0 评论 -
R循环分配变量名
使用assign函数可以实现。for (ii in seq(1, 10, 1)){ nn <- paste0('N', ii) print(nn) data <- c(ii, ii+1, ii+2) assign(nn, data)}原创 2021-08-30 11:30:40 · 1931 阅读 · 0 评论 -
Linux常用命令
彻底删除文件rm -rf <path> 查找文件(iname会忽略大小写)find <path> -name/iname <filename>原创 2021-08-29 20:55:17 · 81 阅读 · 0 评论 -
生信R包安装
infercnv, 需要先安装JAGSJAGS手动安装失败conda install jags 进入R环境install.packages("rjags")if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager")BiocManager::install("infercnv")# testlibrary(infercnv)...原创 2021-08-29 20:53:40 · 1040 阅读 · 0 评论