【数据处理】nii文件解析

先安装nibabel

pip install nibabel

示例：

from nibabel.viewers import OrthoSlicer3D
from nibabel import nifti1
import nibabel as nib
from matplotlib import pylab as plt
import math

# 文件路径
example_path = 'G:/深度学习数据集/synapse分割/averaged-training-images/DET0001801_avg.nii'
img = nib.load(example_path)

# 打印文件信息
print(img)
print(img.dataobj.shape)

# 图像大小和序列大小
width, height, queue = img.dataobj.shape  

# 显示3D图像
OrthoSlicer3D(img.dataobj).show()

# 逐片显示
num = 1
for i in range(queue): 
    img_arr = img.dataobj[:, :, i]
    plt.subplot(3, math.ceil(queue/3), num)
    plt.imshow(img_arr, cmap='gray')
    plt.axis('off')
    num += 1
plt.show()

结果：