igraph study

• Igraph | 统计之都 (中国统计学门户网站，免费统计学服务平台)     
• ChenYibo: 社会网络分析：探索人人网好友推荐系统 | 统计之都 (中国统计学门户网站，免费统计学服务平台)     
• RPubs - Natural Language Analysis     
• iGraph——图挖掘助力社会网络分析-图灵社区     
• R语言的igraph画社交关系图示例
• 数据可视化 | Coursera
• 用R语言进行数据可视化的综合指南（一）
• 用R语言进行数据可视化的综合指南（二）

k-cliques

• network-biology-study-group/07-mn-measures-and-metrics-ii at master · khughitt/network-biology-study-group
• 台灣地區部落格空間之聚合次團體探索分析
• Introduction to soical network methods: Chapter 11: Cliques and sub-groups
• Defining and identifying cograph communities in complex networks - IOPscience
• 社会网络分析指针及其意义_WalkerChu_新浪博客

图

• CRAN Task View: gRaphical Models in R （图相关的包）
• CRAN Task View: Optimization and Mathematical Programming
• Is Rgraphviz no longer available for R? - Stack Overflow
• Bioconductor - graph
• R语言-数据导出_百度经验 （write.table (f,file ="f.csv", sep =",") ）
• igraph R manual pages|subgraph
• r - generating a community graph in igraph - Stack Overflow

Rcpp

• Rcpp · Advanced R. | High performance functions with Rcpp 
• R语言跨界调用C++ | 粉丝日志
• Three ways to call C/C++ from R | R-bloggers
• Series: Using R « Working With Data
• Using R — Calling C Code ‘Hello World!’ | Working With Data

并发

• Editor: R与并行计算 | 统计之都 (中国统计学门户网站，免费统计学服务平台)
• Microsoft's R Strategy | ZDNet

 SNA-社会网络关系

• 关系网络SNA与知识图谱 - 素质云笔记/Recorder... - CSDN博客
• R语言︱SNA-社会关系网络 R语言实现专题（基础篇）（一）
• R语言︱SNA-社会关系网络—igraph包（中心度、中心势）（二）
• R语言︱SNA-社会关系网络—igraph包（社群划分、画图）（三）
• 用GA算法设计22个地点之间最短旅程-R语言实现
• R语言︱贝叶斯网络语言实现及与朴素贝叶斯区别（笔记）
• 关系网络理论︱细讲中介中心性（Betweeness Centrality）
• 笔记︱基于网络节点的node2vec、论文、算法python实现

community

• r - What are the differences between community detection algorithms in igraph? - Stack Overflow
• R: rename community structure detection functions · Issue #692 · igraph/igraph （列举了igraph实现的社团算法）
• Functions to deal with the result of network community detection | igraph R manual pages （处理社区发现结果的函数）
• Communities in igraph （igraph的社区发现）
• R: Agglomerative Nesting (Hierarchical Clustering) （agnes vs hclust）
• Summary of community detection algorithms in igraph 0.6 | R-bloggers
• r - generating a community graph in igraph - Stack Overflow
• igraph R manual pages communities 
• igraph R manual pages cluster_edge_betweenness
• igraph R manual pages cluster_fast_greedy（fastgreedy）
• R tutorial: how to identify communities of items in networks | Psych Networks
• Network analysis with R and igraph: NetSci X Tutorial （详细的介绍了igraph在社会发现上的应用）
• Network communities
• Finding communities in networks with R and igraph
• graph - Identifying cliques in R - Stack Overflow （largest.cliques(g1)）
• Experiments with igraph | What You're Doing Is Rather Desperate
• igraph R manual pages groups （groups(kc)$`1`）

github

• stamkivi/SkypeMafia-visualization: Visualization of #SkypeMafia social graph (using R/igraph)
• bryanyang0528/SNA-of-Social-Media: Social network analysis with igraph package in R
• kateto/R-igraph-Network-Workshop-NetSciX: NetSciX 2016 workshop on network analysis and visualization with R and igraph
• buhrmann/tweetonomy: Social network analysis of twitter data with hadoop, flume, hive and R (igraph).
• Network-Analysis-Key-Players---Community-Detection---Dolphins/Dolphins - Key Player & Community Detection Project.R at master · balajisriraj/Network-Analysis-Key-Players---Community-Detection---Dolphins
• guillermodeandajauregui/NetworkAnalysis_scripts: Scripts and Functions for Network analysis using R - Igraph
• MarlWer/Network-Community-Visualization-App: Network Community Detection App implemented in Shiny and based on qgraph and igraph R Packages (implementation in progress)
• adityapadala/Network_Analysis: Introduction to Network analysis using igraph and the application in real world
• aduispace/EE232E_Graphs-and-Network-Flows: Implementation of graph applications in social network and so on with Python/R/Igraph/...

contract.vertices

• contract.vertices function | R Documentation
• r - Contract vertices the graph and combine attributes - Stack Overflow
• Contracting and simplifying a network graph
• The network structure of CRAN
• igraph R manual pages （igraph-attribute-combination）
• r - How do I merge two nodes into a single node using igraph - Stack Overflow

layout

• igraph R manual pages

Either a function or a numeric matrix. It specifies how the vertices will be placed on the plot.

If it is a numeric matrix, then the matrix has to have one line for each vertex, specifying its coordinates. The matrix should have at least two columns, for the x and y coordinates, and it can also have third column, this will be the z coordinate for 3D plots and it is ignored for 2D plots.

If a two column matrix is given for the 3D plotting function rglplot then the third column is assumed to be 1 for each vertex.

If layout is a function, this function will be called with the graph as the single parameter to determine the actual coordinates. The function should return a matrix with two or three columns. For the 2D plots the third column is ignored.

The default value is layout_nicely, a smart function that chooses a layouter based on the graph.

• dd