用 perl 统计 fasta 文件序列的总长

#!/usr/bin/perl -w

use strict;

die "Usage: $0 <file>\n" unless (@ARGV == 1);

my $lines = 0;
my $bases = 0;

while (my $line = <>){ # <> operator reads one line at a time from the file specified by $ARGV[0].
  chomp $line; 
  next if $line =~ /^>/;
  $lines++;
  $bases += length($line);
}

print "$bases\n";

转载于:https://www.cnblogs.com/liuhui0622/p/4619586.html