ClinicalTrail网站所有数据提取 python

ClinicalTrials网站所有数据提取 python

代码后面对获取的表格数据每一列的含义进行了说明

#! /home/apps/miniconda3/bin/python
from pytrials.client import ClinicalTrials
import pytrials.utils
import pandas as pd
import sys

'''
url = 'https://clinicaltrials.gov/api/query/study_fields?expr=phase+1&fields=NCTId%2CBriefTitle%2CCondition%2CInterventionType%2CInterventionName%2CStartDate%2CPhase&min_rnk=1&max_rnk=20&fmt=csv'
data = pytrials.utils.csv_handler(url)
totalData = pd.DataFrame.from_records(data[1:], columns=data[0])
totalData.to_csv(sys.argv[1], index=False)
'''
phase = sys.argv[2]
ct = ClinicalTrials()
count = ct.get_study_count(search_expr="{}".format(phase))
print(count)
minRank