python处理fasta文件_使用生成器解析fasta文件(python)

这种格式的pyparsing解析器只有几行。请参阅以下代码中的注释：

data = """>1 (PB2)

AATATATTCAATATGGAGAGAATAAAAGAACTAAGAGATCTAATGTCACAGTCTCGCACTCGCGAGATAC

TCACCAAAACCACTGTGGACCACATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCC

TGCACTCAGGATGAAGTGGATGATG

>2 (PB1)

AACCATTTGAATGGATGTCAATCCGACTTTACTTTTCTTGAAAGTTCCAGCGCAAAATGCCATAAGCACC

ACATTTCCCTATACTGGAGACCCTCC"""

from pyparsing import Word, nums, QuotedString, Combine, OneOrMore

# define some basic forms

integer = Word(nums)

key = QuotedString("(", endQuoteChar=")")

# sequences are "words" made up of the characters A, G, C, and T

# we want to match one or more of them, and have the parser combine

# them into a single string (Combine by default requires all of its

# elements to be adjacent within the input string, but we want t