AFNI program: 3drefit

Usage: 3drefit [options] dataset …

Changes some of the information inside a 3D dataset’s header,To see the current values stored in a .HEAD file, use the command
‘3dinfo dataset’. Using 3dinfo both before and after 3drefit is a good idea to make sure the changes have been made correctly!

-orient code    Sets the orientation of the 3D volume(s) in the .BRIK.
                  The code must be 3 letters, one each from the
                  pairs {R,L} {A,P} {I,S}.  The first letter gives
                  the orientation of the x-axis, the second the
                  orientation of the y-axis, the third the z-axis:
                     R = right-to-left         L = left-to-right
                     A = anterior-to-posterior P = posterior-to-anterior
                     I = inferior-to-superior  S = superior-to-inferior
               ** WARNING: when changing the orientation, you must be sure
                  to check the origins as well, to make sure that the volume
                  is positioned correctly in space.

-space spcname  Associates the dataset with a specific template type, e.g.
                  TLRC, MNI, ORIG. The default assumed for +tlrc datasets is
                  'TLRC'. One use for this attribute is to use MNI space
                  coordinates and atlases instead of the default TLRC space.
               ** See WARNING2 for -view option.