医学图像nii.gz(dicom)文件转图片png

nii2png

import os
import cv2
import numpy as np
import nibabel as nib
import SimpleITK as sitk
from PIL import Image

file_root = r'F:\' 
save_path = r'F:\'
#file_list
file_list = os.listdir(file_root)
print(file_list)
for img_name in file_list:
    if img_name.endswith('.nii.gz'):
        img_path = file_root + img_name
        print(img_path)
        #data = np.load(img_path)
        #img1 = nib.load(img_path) 
        #img = img1.get_fdata()
        img1 = sitk.ReadImage(img_path)
        img = sitk.GetArrayFromImage(img1)
        img = (img - img.min())/(img.max()-img.min())
        #print(img.min(),img.max())
        img = img * 255
        cv2.imwrite(save_path +img_name +'.png', img)           

读进来的数组进行归一化后再转为png，图片会变得清晰。