python读取nii文件_python 读取.nii格式图像实例

我就废话不多说了，大家还是直接看代码吧~

# encoding=utf8

'''

查看和显示nii文件

'''

import matplotlib

matplotlib.use('TkAgg')

from matplotlib import pylab as plt

import nibabel as nib

from nibabel import nifti1

from nibabel.viewers import OrthoSlicer3D

example_filename = '../ADNI_nii/ADNI_002_S_0413_MR_MPR____N3__Scaled_2_Br_20081001114937668_S14782_I118675.nii'

img = nib.load(example_filename)

print (img)

print (img.header['db_name']) #输出头信息

width,height,queue=img.dataobj.shape

OrthoSlicer3D(img.dataobj).show()

num = 1

for i in range(0,queue,10):

img_arr = img.dataobj[:,:,i]

plt.subplot(5,4,num)

plt.imshow(img_arr,cmap='gray')

num +=1

plt.show()

3D显示结果：