VMD (分子可视化软件)
LINUX_64 OpenGL, CUDA (Linux (64-bit Intel/AMD x86) with CUDA)
安装过程
(1)修改configure文件
$install_bin_dir=/home/**/vmd/bin
$install_library_dir=/home/**/vmd/lib
(2)./configure
(3)cd src
make install
显示 :make sure /home/yc/vmd in your path
VMD installation complete.Enjoy!
(4)cp /home/**/vmd/bin/vmd /usr/local/bin
(5)vmd即可以出现图形界面
【作者】 Biophysics Group,University of Illinois at Urbana-Champaign (UIUC)
【语言版本】 English
【收费情况】 免费
【用途】 VMD is a molecular visualization
program for displaying, animating, and analyzing large biomolecular
systems using 3-D graphics and built-in scripting. VMD supports
computers running MacOS-X, Unix, or Windows, is distributed free of
charge, and includes source code.
VMD is designed for the visualization and
analysis of biological systems such as proteins, nucleic acids, lipid
bilayer assemblies, etc. It may be used to view more general molecules,
as VMD can read standard Protein Data Bank (PDB) files and display the
contained structure. VMD provides a wide variety of methods for
rendering and coloring a molecule: simple points and lines, CPK spheres
and cylinders, licorice bonds, backbone tubes and ribbons, cartoon
drawings, and others. VMD can be used to animate and analyze the
trajectory of a molecular dynamics (MD) simulation. In particular, VMD
can act as a graphical front end for an external MD program by
displaying and animating a molecule undergoing simulation on a remote
computer. VMD uses OpenGL to provide high performance 3-D molecular
graphics。
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链接地址:http://blog.sciencenet.cn/blog-316926-482506.html
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