我搜集的水稻基因组序列,如果有新序列出来,请告诉我下
16个下面这篇文章提到的水稻基因组
包括这些品种:
Azucena_GJ-trop1
IR64_XI-1B1
IRGC_109232-1_XI-3B2
IRGC12485_cB
IRGC132424_XI-2A
IRGC19961_GJ-trop2
IRGC34749_cA2
IRGC52339_XI-2B
IRGC53418_XI-1B2
IRGC65972_XI-3B1
IRGC80273_GJ-subtrp
IRGC81487-1_XI-3A
mh63_2017_XI-adm(有两个基因组版本)
N22_v1
RAP_IRGSP-1.0_genome.fasta(最常用的水稻参考基因组)
zs97_2017(有两个基因版本)
15个其它水稻品种基因组:
A123_Japonica
Bio226_Indica
Carolina_Gold
HEG4_Japonica
Hitomebore_Japonica
HR12_Indica
IR8_Indica
kittake_japonica
Koshihikari_Japonica
Lperr_v1.4
R498
R600_indica-japonica
tetep
ZH11
9311(多个版本)
7个野生稻基因组:
O.barthii_v1.3
O.brachyantha_v1.4
O.glaberrima_v1
O.glumaepatula_v1.5
O.nivara_v1.0
O.punctata_v1.2
O.rufipogon_W1943
已经从GenBank获得全部序列,文件比较大,看我啥时候能全部上传到云盘上。
涉及的accession number(根据冒号右边的序列号,可以从GenBank获得相应的序列)
chromosome 1: CM025769.1
chromosome 2: CM025770.1
chromosome 3: CM025771.1
chromosome 5: CM025772.1
chromosome 6: CM025773.1
chromosome 7: CM025774.1
chromosome 8: CM025775.1
chromosome 9: CM025776.1
chromosome 10: CM025777.1
chromosome 11: CM025778.1
chromosome 12: CM025779.1 genome1
chromosome 1: CM020658.1
chromosome 2: CM020659.1
chromosome 3: CM020660.1
chromosome 4: CM020661.1
chromosome 5: CM020662.1
chromosome 6: CM020663.1
chromosome 7: CM020664.1
chromosome 8: CM020665.1
chromosome 9: CM020666.1
chromosome 10: CM020667.1
chromosome 11: CM020668.1
chromosome 12: CM020669.1 genome2
chromosome 3: CM025766.1
chromosome 7: CM025767.1
chromosome 12: CM025768.1
chromosome 1: CM012053.1 27
chromosome 2: CM012054.1
chromosome 3: CM012055.1
chromosome 4: CM012056.1
chromosome 5: CM012057.1
chromosome 6: CM012058.1
chromosome 7: CM012059.1
chromosome 8: CM012060.1
chromosome 9: CM012061.1
chromosome 10: CM012062.1
chromosome 11: CM012063.1
chromosome 12: CM012064.1 38 genome3
chromosome 1: CM020876.1 39
chromosome 2: CM020877.1
chromosome 3: CM020878.1
chromosome 4: CM020879.1
chromosome 5: CM020880.1
chromosome 6: CM020881.1
chromosome 7: CM020882.1
chromosome 8: CM020883.1
chromosome 9: CM020884.1
chromosome 10: CM020885.1
chromosome 11: CM020886.1
chromosome 12: CM020887.1 50 genome4
chromosome 1: CM020621.1 51
chromosome 2: CM020622.1
chromosome 3: CM020623.1
chromosome 4: CM020624.1
chromosome 5: CM020625.1
chromosome 6: CM020626.1
chromosome 7: CM020627.1
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