安装
#Ubuntu 20.04:
echo "deb http://security.ubuntu.com/ubuntu bionic-security main" \
| sudo tee /etc/apt/sources.list.d/bionic-security.list
wget -qO - https://packages.irods.org/irods-signing-key.asc | sudo apt-key add -
echo "deb [arch=amd64] https://packages.irods.org/apt/ bionic main" \
| sudo tee /etc/apt/sources.list.d/renci-irods.list
sudo apt update
cat <<'EOF' | sudo tee > /etc/apt/preferences.d/irods
Package: irods-*
Pin: version 4.2.8
Pin-Priority: 1001
EOF
sudo apt install irods-icommands
登录
官网注册
bash-3.2$ iinit
One or more fields in your iRODS environment file (irods_environment.json) are
missing; please enter them.
Enter the host name (DNS) of the server to connect to: data.cyverse.org
Enter the port number: 1247
Enter your irods user name: cyverse-user
Enter your irods zone: iplant
Those values will be added to your environment file (for use by
other i-commands) if the login succeeds.
Enter your current iRODS password:
bash-3.2$
进入目录下载
icd /iplant/home/shared/panzea/hapmap3/hmp321/imputed/
iget -r -P uplifted_APGv4
#v显示细节