Perl练习01之计算一条read的ATGC个数GC含量格式化输出

gccount_read.pl

#!/usr/bin/perl
use strict;
use warnings;
my $read = "AACAAACCCCTTTTCTCTATTAAAAAATACAAAATAGCTTAGCTGCGGCATAGTGGAGCACG";
my $G = ($read =~ s/G/G/g);#s为匹配表示匹配,($read =~ s/G/G/g)返回匹配次数个数
my $C = ($read =~ s/C/C/g);
my $A = ($read =~ s/A/A/g);
my $T = ($read =~ s/T/T/g);
my $total = $G + $C + $A +$T;
my $GC_P = ($G + $C)/$total;

#格式化输出printf
printf "\$G:%d\n\$C:%d\n\$A:%d\n\$T:%d\n\$total:%d\n\$GC_P:%.2f\n",($G,$C,$A,$T,$total,$GC_P);

#sprintf格式化不输出
my $result = sprintf("\$G:%d\n\$C:%d\n\$A:%d\n\$T:%d\n\$total:%d\n\$GC_P:%.2f\n",($G,$C,$A,$T,$total,$GC_P));

#输出到文件GC.file
open OUT,">",&#