最近有小伙伴问到带mantel test检验的相关性矩阵怎么画,于是小编就在网上找到了相关的绘图示例,整理了网上各位大神关于ggcor包的下载以及该包自带的示例代码供各位小伙伴参考使用~
首先是要安装ggcor这个包。由于该包的作者已经下架了这个包,所以只能自己下载压缩包本地安装,小编主要参考的是这篇文章:
https://www.zhihu.com/question/409189621/answer/1842210647
示例代码
ggcor包自带的几个绘图示例
Correlation plot
library(ggplot2)
library(ggcor)
set_scale()
quickcor(mtcars) + geom_square()
quickcor(mtcars, type = "upper") + geom_circle2()
quickcor(mtcars, cor.test = TRUE) +
geom_square(data = get_data(type = "lower", show.diag = FALSE)) +
geom_mark(data = get_data(type = "upper", show.diag = FALSE), size = 2.5) +
geom_abline(slope = -1, intercept = 12)
Mantel test plot
library(dplyr)
library