python 关联矩阵,在Python中使用相关矩阵创建聚类

all, I have a correlation matrix of 21 industry sectors. Now I want to split these 21 sectors into 4 or 5 groups, with sectors of similar behaviors grouped together.

Can experts shed me some lights on how to do this in Python please? Thanks much in advance!

解决方案

You might explore the use of Pandas DataFrame.corr and the scipy.cluster Hierarchical Clustering package

import pandas as pd

import scipy.cluster.hierarchy as spc

df = pd.DataFrame(my_data)

corr = df.corr().values

pdist = spc.distance.pdist(corr)

linkage = spc.linkage(pdist, method='complete')

idx = spc.fcluster(linkage, 0.5 * pdist.max(), 'distance')

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