centos安装qiime2

最新推荐文章于 2024-01-25 09:22:38 发布

TANGLi83

最新推荐文章于 2024-01-25 09:22:38 发布

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文章标签： anaconda

本文链接：https://blog.csdn.net/Arkardia/article/details/112999427

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conda帮助文档
 qiime2下载帮助页面

 yum install bzip2
 yum install wget
 wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
 sh ./Miniconda3-latest-Linux-x86_64.sh
 source ~/.bashrc
 conda config --add channels https://mirrors.ustc.edu.cn/anaconda/pkgs/main/
 conda config --add channels https://mirrors.ustc.edu.cn/anaconda/pkgs/free/
 conda config --add channels https://mirrors.ustc.edu.cn/anaconda/cloud/conda-forge/
 conda config --add channels https://mirrors.ustc.edu.cn/anaconda/cloud/msys2/
 conda config --add channels https://mirrors.ustc.edu.cn/anaconda/cloud/bioconda/
 conda config --add channels https://mirrors.ustc.edu.cn/anaconda/cloud/menpo/
 conda update conda
 conda install biom-format
 conda install bioconductor-microbiome
 wget https://data.qiime2.org/distro/core/qiime2-2021.2-py36-linux-conda.yml
 conda env create -n qiime2-2021.2 --file qiime2-2021.2-py36-linux-conda.yml

 conda activate qiime2