五分钟学会Seaborn

General form

Function(x= , y= , data= , hue= ) 
	data=dataframe数据
	x=
	y=
	kind=
	col= # 分栏
	hue=分类
	hue_order=('up','unchange','down') # 分类顺序
	palette=['red','gray','blue'] # 分类颜色（按照分类顺序）
	ci='sd' # std
	style=‘*, #, ^, ...’ # 风格
	size=(15, 20) # 尺寸	

1. 基本绘图

1. 散点图：scatterplot(x= , y= , data= )
2. 线性图：lineplot(x= , y= , data= )
3. 通用式：relplot(kind='scatter/line', x= , y= , data= )

2. Categorical Plots(分类)

1. categorical scatter plots:
	分布散点图：stripplot()
	分布密度散点图：swarmplot() #功能同上，仅不覆盖
2. categorical distribution plots:
	分布箱线图：boxplot()
	分布小提琴图：violinplot()
3. categorical estimate plots:
	pointplot()
	barplot()
	countplot()
4. 通用式：
	catplot(kind='strip/swarm/box/violin/point/bar/count', x= , y= , data= )

3. Distribution Plots(分布/直方)

1. 直方图：displot()
2. 核密度图：kdeplot() #kernel="gau..." ：高斯分布
3. 联合分布图：joinplot() #kind="kde/strip..."
4. 变量关系图：pairplot() #探索变量间==两两关系==

4. Regression Plots(回归)

1. Implot()

5. Matrix Plots(矩阵)

1. heatmap()
2. clustermap()

6. FaceGrid

7. PairGrid

8. Theme

sns.set_style(‘white’) #白色网格背景

9. Color

10.Tips

# -*- coding: utf-8 -*-
"""
Created on Wed Dec 23 08:48:58 2020
@author: Bio-windows
"""

import seaborn as sns
import matplotlib.pyplot as plt
import numpy as np

def picture1():
    '''the one way'''
    x = np.linspace(0,20)
    y1 = x
    y2 = x**2
    y3 = x**3
    fig,ax = plt.subplots(2,2)
    fig.subplots_adjust(wspace=0.5, hspace=0.5)
    
    sns.scatterplot(x,y1,ax=ax[0,0])
    ax[0,0].set_title('liner')
    
    sns.lineplot(x,y2,ax=ax[0,1])
    ax[0,1].set_title('平方')
    
    sns.lineplot(x,y3,ax=ax[1,0])
    ax[1,0].set_title('三次方')
    return None

def picture2():
    '''the 2nd way'''
    x = np.linspace(0,20)
    y1 = x
    y2 = x**2
    y3 = x**3
    fig = plt.figure()
    
    fig.add_subplot(211)
    sns.scatterplot(x,y1)
    plt.title('liner')
    
    fig.add_subplot(223)
    sns.lineplot(x,y3)
    plt.title('cifang')
    
    fig.add_subplot(224)
    sns.lineplot(x,y2)
    plt.title('sancifang')
    return None
def picture3():
    '''the 2nd way'''
    x = np.linspace(0,20)
    y1 = x
    y2 = x**2
    y3 = x**3
    fig = plt.figure(figsize=(8,8))
    
    ax = fig.add_subplot(211)
    sns.scatterplot(x,y1,ax=ax)
    ax.set_title('liner')
    ax.set_xlabel('x')
    ax.set_ylabel('y1')
    
    ax = fig.add_subplot(223)
    sns.lineplot(x,y2,ax=ax)
    ax.set_title('liner')
    ax.set_title('ercifang')
    
    ax = fig.add_subplot(224)
    sns.lineplot(x,y3,ax=ax)
    ax.set_title('sancifang')
    
    return None
if __name__ == '__main__':
    '''main function'''
    sns.set_palette('Set2')
    picture1()
    picture2()
    picture3()

# -*- coding: utf-8 -*-
"""
Created on Wed Dec 23 19:15:43 2020
@author: Bio-windows
"""

import pandas as pd
import matplotlib.pyplot as plt
import seaborn as sns
import numpy as np

def sig_src(thr_num,sig_num):
    '''筛选差异基因'''
    dge = pd.read_excel('D:/workstations/组学分析/蛋白质组学/3492报告及附件/报告及附件/3-2表达差异分析/3-2-1差异结果数量统计/附件3_蛋白质定量和差异分析列表.xlsx')
    for i in dge.index:
        if (dge.loc[i,'mutant1P/WT1P'] >= thr_num )& (dge.loc[i,'t test p value'] < sig_num):
            dge.loc[i,'sig'] = 'up'
        elif (dge.loc[i,'mutant1P/WT1P'] <= (1/thr_num)) & (dge.loc[i,'t test p value'] < sig_num):
            dge.loc[i,'sig'] = 'down'
        else:
            dge.loc[i,'sig'] = 'unchange'
            
    FdPvalue = dge[(dge['sig']=='up') | (dge['sig']=='down')]
    FdPvalue.to_csv('FoldChange'+str(thr_num)+'Pvalue'+str(sig_num)+'.csv')
    return dge,thr_num

def picture(x,ax):
    dge,thr_num = x
    sns.scatterplot(data=dge,\
                    x=np.log2(dge['mutant1P/WT1P']),\
                        y=-np.log10(dge['t test p value']),\
                            hue='sig',hue_order=('up','unchange','down'),palette=['red','gray','blue'],ax=ax)
    ax.set_title('FoldChange='+str(thr_num))
    ax.set_xlabel('log2(mutant1P/WT1P)')
    ax.set_ylabel('-log10(t test p value)')
    
if __name__ == '__main__':
    '''main function'''
        
    fig = plt.figure(figsize=(10,10))
    ax = fig.add_subplot(221)
    picture(sig_src(thr_num=1.2,sig_num=0.05),ax)
    ax = fig.add_subplot(222)
    picture(sig_src(thr_num=1.5,sig_num=0.05),ax)
    ax = fig.add_subplot(223)
    picture(sig_src(thr_num=1.8,sig_num=0.05),ax)
    ax = fig.add_subplot(224)
    picture(sig_src(thr_num=2,sig_num=0.05),ax)
    
    fig.savefig('DGE.png',dpi=300,format='png')