gdb 怎么打印eigen库的值
1 步骤
这部分内容来自:https://blog.csdn.net/tony_513/article/details/72937692
- 对于Eigen,你要在你的目录下,以我自己为例,我在/home/tony下创建了一个文件夹叫做eigen_configuration(你可以是任何名字)
- 然后创建一个python文档,叫做printers.py,将本文最后面的py代码的内容复制到这个文件里。
- eigen_configuration里面,再建一个空文档叫做 init.py(我用的是__init__.py)以便系统能够找到printers文档
- 然后在/home/tony目录下创建一个叫做.gdbinit的文档,将以下内容复制进来
python
import sys
sys.path.insert(0, '/home/tony/eigen_configuration')
from printers import register_eigen_printers
register_eigen_printers (None)
end
2 前后效果对比
使用前
使用后
eclipse的支持
eclipse里面,我将.gdbinit配置指向上面创建的.gdbinit也不行,后来尝试在Debugger Console里面执行了以下语句:
set print pretty on
source /home/tony/.gdbinit
然后就可以了.
注意,上面两行代码每次调试都要执行,我是在main入口就打了断点,然后执行了那两行指令后,再接着执行的。
直接鼠标放到Eigen变量上的效果
在Debugger Console窗口里面执行 p x,得到下面的效果
py库
https://github.com/dmillard/eigengdb/tree/master/eigengdb
#!/usr/bin/env python
# -*- coding: utf-8 -*-
# This file is part of Eigen, a lightweight C++ template library
# for linear algebra.
#
# Copyright (C) 2009 Benjamin Schindler <bschindler@inf.ethz.ch>
# Copyright (C) 2019 David Millard <dmillard@usc.edu>
#
# This Source Code Form is subject to the terms of the Mozilla Public
# License, v. 2.0. If a copy of the MPL was not distributed with this
# file, You can obtain one at http://mozilla.org/MPL/2.0/.
# Pretty printers for Eigen::Matrix
# This is still pretty basic as the python extension to gdb is still pretty basic.
# It cannot handle complex eigen types and it doesn't support many of the other eigen types
# This code supports fixed size as well as dynamic size matrices
# To use it:
#
# * Create a directory and put the file as well as an empty __init__.py in
# that directory.
# * Create a ~/.gdbinit file, that contains the following:
# python
# from printers import register_eigen_printers
# register_eigen_printers (None)
# end
import gdb
import re
import itertools
import numpy as np
from bisect import bisect_left
# Basic row/column iteration code for use with Sparse and Dense matrices
class _MatrixEntryIterator(object):
def __init__(self, rows, cols, rowMajor):
self.rows = rows
self.cols = cols
self.currentRow = 0
self.currentCol = 0
self.rowMajor = rowMajor
def __iter__(self):
return self
def next(self):
return self.__next__() # Python 2.x compatibility
def __next__(self):
row = self.currentRow
col = self.currentCol
if self.rowMajor == 0:
if self.currentCol >= self.cols:
raise StopIteration
self.currentRow = self.currentRow + 1
if self.currentRow >= self.rows:
self.currentRow = 0
self.currentCol = self.currentCol + 1
else:
if self.currentRow >= self.rows:
raise StopIteration
self.currentCol = self.currentCol + 1
if self.currentCol >= self.cols:
self.currentCol = 0
self.currentRow = self.currentRow + 1
return (row, col)
class EigenMatrixPrinter:
"Print Eigen Matrix or Array of some kind"
def __init__(self, variety, val):
"Extract all the necessary information"
# Save the variety (presumably "Matrix" or "Array") for later usage
self.variety = variety
# The gdb extension does not support value template arguments - need to extract them by hand
type = val.type
if type.code == gdb.TYPE_CODE_REF:
type = type.target()
self.type = type.unqualified().strip_typedefs()
tag = self.type.tag
regex = re.compile('\<.*\>')
m = regex.findall(tag)[0][1:-1]
template_params = m.split(',')
template_params = [x.replace(" ", "") for x in template_params]
if template_params[1] == '-0x00000000000000001' or template_params[
1] == '-0x000000001' or template_params[1] == '-1':
self.rows = val['m_storage']['m_rows']
else:
self.rows = int(template_params[1])
if template_params[2] == '-0x00000000000000001' or template_params[
2] == '-0x000000001' or template_params[2] == '-1':
self.cols = val['m_storage']['m_cols']
else:
self.cols = int(template_params[2])
self.options = 0 # default value
if len(template_params) > 3:
self.options = template_params[3]
self.rowMajor = (int(self.options) & 0x1)
self.innerType = self.type.template_argument(0)
self.val = val
# Fixed size matrices have a struct as their storage, so we need to walk through this
self.data = self.val['m_storage']['m_data']
if self.data.type.code == gdb.TYPE_CODE_STRUCT:
self.data = self.data['array']
self.data = self.data.cast(self.innerType.pointer())
class _iterator(_MatrixEntryIterator):
def __init__(self, rows, cols, dataPtr, rowMajor):
super(EigenMatrixPrinter._iterator,
self).__init__(rows, cols, rowMajor)
self.dataPtr = dataPtr
def __next__(self):
row, col = super(EigenMatrixPrinter._iterator, self).__next__()
item = self.dataPtr.dereference()
self.dataPtr = self.dataPtr + 1
if (self.cols == 1): #if it's a column vector
return ('[%d]' % (row, ), item)
elif (self.rows == 1): #if it's a row vector
return ('[%d]' % (col, ), item)
return ('[%d,%d]' % (row, col), item)
def to_string(self):
mat = np.zeros((self.rows, self.cols), dtype=np.float64)
for row in range(self.rows):
for col in range(self.cols):
if self.rowMajor:
offset = row * self.cols + col
else:
offset = col * self.rows + row
item = (self.data + offset).dereference()
try:
# Basic stan-math support
item['val']
eval_string = "(*({}*)({})).val()".format(
item.type, item.address)
item = gdb.parse_and_eval(eval_string)
except (gdb.error):
pass
try:
# Basic CppAD support
item['value_']
eval_string = "(*({}*)({})).value_".format(
item.type, item.address)
item = gdb.parse_and_eval(eval_string)
except (gdb.error):
pass
mat[row, col] = float(item)
return "Eigen::%s<%s,%d,%d,%s> (data ptr: %s)\n%s\n" % (
self.variety, self.innerType, self.rows, self.cols,
"RowMajor" if self.rowMajor else "ColMajor", self.data, mat)
class EigenSparseMatrixPrinter:
"Print an Eigen SparseMatrix"
def __init__(self, val):
"Extract all the necessary information"
type = val.type
if type.code == gdb.TYPE_CODE_REF:
type = type.target()
self.type = type.unqualified().strip_typedefs()
tag = self.type.tag
regex = re.compile('\<.*\>')
m = regex.findall(tag)[0][1:-1]
template_params = m.split(',')
template_params = [x.replace(" ", "") for x in template_params]
self.options = 0
if len(template_params) > 1:
self.options = template_params[1]
self.rowMajor = (int(self.options) & 0x1)
self.innerType = self.type.template_argument(0)
self.val = val
self.data = self.val['m_data']
self.data = self.data.cast(self.innerType.pointer())
class _iterator(_MatrixEntryIterator):
def __init__(self, rows, cols, val, rowMajor):
super(EigenSparseMatrixPrinter._iterator,
self).__init__(rows, cols, rowMajor)
self.val = val
def __next__(self):
row, col = super(EigenSparseMatrixPrinter._iterator,
self).__next__()
# repeat calculations from SparseMatrix.h:
outer = row if self.rowMajor else col
inner = col if self.rowMajor else row
start = self.val['m_outerIndex'][outer]
end = ((start + self.val['m_innerNonZeros'][outer])
if self.val['m_innerNonZeros'] else
self.val['m_outerIndex'][outer + 1])
# and from CompressedStorage.h:
data = self.val['m_data']
if start >= end:
item = 0
elif (end > start) and (inner == data['m_indices'][end - 1]):
item = data['m_values'][end - 1]
else:
# create Python index list from the target range within m_indices
indices = [
data['m_indices'][x] for x in range(int(start),
int(end) - 1)
]
# find the index with binary search
idx = int(start) + bisect_left(indices, inner)
if ((idx < end) and (data['m_indices'][idx] == inner)):
item = data['m_values'][idx]
else:
item = 0
return ('[%d,%d]' % (row, col), item)
def children(self):
if self.data:
return self._iterator(self.rows(), self.cols(), self.val,
self.rowMajor)
return iter([]) # empty matrix, for now
def rows(self):
return self.val['m_outerSize'] if self.rowMajor else self.val[
'm_innerSize']
def cols(self):
return self.val['m_innerSize'] if self.rowMajor else self.val[
'm_outerSize']
def to_string(self):
if self.data:
status = ("not compressed"
if self.val['m_innerNonZeros'] else "compressed")
else:
status = "empty"
dimensions = "%d x %d" % (self.rows(), self.cols())
layout = "row" if self.rowMajor else "column"
return "Eigen::SparseMatrix<%s>, %s, %s major, %s" % (
self.innerType, dimensions, layout, status)
class EigenQuaternionPrinter:
"Print an Eigen Quaternion"
def __init__(self, val):
"Extract all the necessary information"
# The gdb extension does not support value template arguments - need to extract them by hand
type = val.type
if type.code == gdb.TYPE_CODE_REF:
type = type.target()
self.type = type.unqualified().strip_typedefs()
self.innerType = self.type.template_argument(0)
self.val = val
# Quaternions have a struct as their storage, so we need to walk through this
self.data = self.val['m_coeffs']['m_storage']['m_data']['array']
self.data = self.data.cast(self.innerType.pointer())
class _iterator:
def __init__(self, dataPtr):
self.dataPtr = dataPtr
self.currentElement = 0
self.elementNames = ['x', 'y', 'z', 'w']
def __iter__(self):
return self
def next(self):
return self.__next__() # Python 2.x compatibility
def __next__(self):
element = self.currentElement
if self.currentElement >= 4: #there are 4 elements in a quanternion
raise StopIteration
self.currentElement = self.currentElement + 1
item = self.dataPtr.dereference()
self.dataPtr = self.dataPtr + 1
return ('[%s]' % (self.elementNames[element], ), item)
def children(self):
return self._iterator(self.data)
def to_string(self):
return "Eigen::Quaternion<%s> (data ptr: %s)" % (self.innerType,
self.data)
def build_eigen_dictionary():
pretty_printers_dict[re.compile(
'^Eigen::Quaternion<.*>$')] = lambda val: EigenQuaternionPrinter(val)
pretty_printers_dict[re.compile(
'^Eigen::Matrix<.*>$')] = lambda val: EigenMatrixPrinter("Matrix", val)
pretty_printers_dict[re.compile(
'^Eigen::SparseMatrix<.*>$')] = lambda val: EigenSparseMatrixPrinter(val
)
pretty_printers_dict[re.compile(
'^Eigen::Array<.*>$')] = lambda val: EigenMatrixPrinter("Array", val)
def register_eigen_printers(obj):
"Register eigen pretty-printers with objfile Obj"
if obj == None:
obj = gdb
obj.pretty_printers.append(lookup_function)
def lookup_function(val):
"Look-up and return a pretty-printer that can print va."
type = val.type
if type.code == gdb.TYPE_CODE_REF:
type = type.target()
type = type.unqualified().strip_typedefs()
typename = type.tag
if typename == None:
return None
for function in pretty_printers_dict:
if function.search(typename):
return pretty_printers_dict[function](val)
return None
pretty_printers_dict = {}
build_eigen_dictionary()