使用ggplot2 DIY Dotplot:即能在XY轴映射2种分类

愿武艺晴小朋友一定得每天都开心 


> Dotplot图的优点中有一个我蛮受用:它能完全掩盖掉样本count 容量大小的差别!

markers <- list()  # custom geneset

markers$proliferation <- c("Yes1","Adgrg1","Samsn1","Id1","Gypa","Cd63","Lyl1","Acrv1","Adamtsl4","Mpp1","Neu1","Pold4","Hbb-bt","Tnnt1","Esr1","Irf4","Lmo2","Alas2","Cmtm6","Clec11a","Rit1") # ACOSTA_PROLIFERATION_INDEPENDENT_MYC_TARGETS_DN

memory <- irGSEA.score(object = memory,
                               assay = "RNA",  #4个样本一起算
                               slot = "data", seeds = 123, ncores = 10,
                               min.cells = 3, min.feature = 0,
                               custom = T, geneset = markers,  
                               subcate

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