itk::ConfidenceConnectedImageFilter
ITK的官方例子:
https://itk.org/Doxygen/html/Examples_2Segmentation_2ConfidenceConnected3D_8cxx-example.html#_a6
今天刚实验一下,搞明白过来补。
http://www.doc88.com/p-3932166949321.html这是一个肝脏肿瘤提取的论文,里面介绍了ITK的几种种子连接算法。可以了解一下
#include "itkConfidenceConnectedImageFilter.h"
#include "itkCastImageFilter.h"
#include "itkCurvatureFlowImageFilter.h"
#include "itkImageFileReader.h"
#include "itkImageFileWriter.h"
// Software Guide : BeginLatex
//
// This example is a 3D version of the previous ConfidenceConnected example.
// In this particular case, we are extracting the white matter from an input
// Brain MRI dataset.
//
// Software Guide : EndLatex
int main( int argc, char *argv[] )
{
if( argc < 3 )
{
std::cerr << "Missing Parameters " << std::endl;
std::cerr << "Usage: " << argv[0];
std::cerr << " inputImage outputImage " << std::endl;
return EXIT_FAILURE;
}
using InternalPixelType = float;
constexpr unsigned int Dimension = 3;
using InternalImageType = itk::Image< InternalPixelType, Dimension >;
using OutputPixelType = unsigned char;
using OutputImageType = itk::Image< OutputPixelType, Dimension >;
using CastingFilterType =
itk::CastImageFilter< InternalImageType, OutputImageType >;
CastingFilterType::Pointer caster = CastingFilterType::New();
using ReaderType = itk::ImageFileReader< InternalImageType >;
using WriterType = itk::ImageFileWriter< OutputImageType >;
ReaderType::Pointer reader = ReaderType::New();
WriterType::Pointer writer = WriterType::New();
reader->SetFileName( argv[1] );
writer->SetFileName( argv[2] );
using CurvatureFlowImageFilterType =
itk::CurvatureFlowImageFilter< InternalImageType, InternalImageType >;
CurvatureFlowImageFilterType::Pointer smoothing =
CurvatureFlowImageFilterType::New();
using ConnectedFilterType =
itk::ConfidenceConnectedImageFilter<InternalImageType, InternalImageType>;
ConnectedFilterType::Pointer confidenceConnected = ConnectedFilterType::New();
smoothing->SetInput( reader->GetOutput() );
confidenceConnected->SetInput( smoothing->GetOutput() );
caster->SetInput( confidenceConnected->GetOutput() );
writer->SetInput( caster->GetOutput() );
smoothing->SetNumberOfIterations( 2 );
smoothing->SetTimeStep( 0.05 );
confidenceConnected->SetMultiplier( 2.5 );
confidenceConnected->SetNumberOfIterations( 5 );
confidenceConnected->SetInitialNeighborhoodRadius( 2 );
confidenceConnected->SetReplaceValue( 255 );
InternalImageType::IndexType index1;
index1[0] = 118;
index1[1] = 133;
index1[2] = 92;
confidenceConnected->AddSeed( index1 );
InternalImageType::IndexType index2;
index2[0] = 63;
index2[1] = 135;
index2[2] = 94;
confidenceConnected->AddSeed( index2 );
InternalImageType::IndexType index3;
index3[0] = 63;
index3[1] = 157;
index3[2] = 90;
confidenceConnected->AddSeed( index3 );
InternalImageType::IndexType index4;
index4[0] = 111;
index4[1] = 150;
index4[2] = 90;
confidenceConnected->AddSeed( index4 );
InternalImageType::IndexType index5;
index5[0] = 111;
index5[1] = 50;
index5[2] = 88;
confidenceConnected->AddSeed( index5 );
try
{
writer->Update();
}
catch( itk::ExceptionObject & excep )
{
std::cerr << "Exception caught !" << std::endl;
std::cerr << excep << std::endl;
return EXIT_FAILURE;
}
return EXIT_SUCCESS;
}