学术绘图
TTS56
1. 单细胞数据分析
2. 图像识别
3. 单细胞 + 深度学习
4. 数据可视化
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ggplot主题
ggplot 主题# 导入 yuansh 的专用 themepdf_dir = 'C:/Users/yuans/Desktop/'ggscale = 0.5yuansh_theme = ggplot2::theme(title = element_text(size =16*ggscale), axis.title = element_text(size = 12*ggscale),原创 2021-06-28 08:57:06 · 365 阅读 · 0 评论 -
R语言聚类 TSNE PCA
导入必要的包library(factoextra)library(Rtsne)library("FactoMineR")#画主成分分析图需要加载这两个包层次聚类要分成两个步骤:计算距离层次聚类#先求样本之间两两相似性result <- dist(df, method = "euclidean")#产生层次结构result_hc <- hclust(d = result, method = "ward.D2")# 自行判断应该聚成几类num_cluster = 4o原创 2021-06-28 08:56:00 · 1055 阅读 · 0 评论 -
R语言通路富集
library(ggplot2)library(magrittr)library(dplyr)library(stringr)options(stringsAsFactors = F)options(as.is = T)setwd('~/Desktop/kk_result20201101/')导入数据#df1 = read.table("GSE116174kk_down.txt",sep = '\t',header = T)#df2 = read.table("GSE116174k原创 2021-06-28 08:55:28 · 2470 阅读 · 0 评论 -
python-绘制嵌套子图
导入模块import osimport mathimport itertoolsimport warningsimport numpy as npimport pandas as pdimport matplotlib.pyplot as pltfrom collections import Counter%matplotlib inline%config InlineBackend.figure_format = 'svg'warnings.filterwarnings("ignor原创 2021-02-24 12:09:12 · 1084 阅读 · 0 评论