早在三年前我就整理并且制作了TCGA肿瘤数据库知识图谱视频教程,一年半前免费公布在生信技能树的B站,现在勉勉强强也快有两万的观看量。
- 视频地址:https://www.bilibili.com/video/av49363776
- 代码地址:https://github.com/jmzeng1314/tcga_example
阅读量如下:
![cc17ab4f181020c14fa97f0869b71552.png](https://img-blog.csdnimg.cn/img_convert/cc17ab4f181020c14fa97f0869b71552.png)
但是我有预感,这个阅读量会暴涨,里面的干货知识不能再被埋没了,课程配套代码发在GitHub的TCGA视频课程上面, 如下:
step00-install-packages.R
step01-getData-from-GDC.R
step01-getData-from-RTCGA.R
step01-getData-from-Xena.R
step01-getData-from-firehose.R
step02-DEG-3-packages.R
step03-batch-logRank.R
step04-batch-coxp.R
step05-lasso.R
step06-coxph-forest.R
step07-risk-score-distribution.R
step08-Random-foreast.R
step09-miRNA-downstream.R
step10-maftools.R
step11-boxplot.R
step12-correlation.R
step13-split-cohort.