#/usr/bin/python
#!-*- coding:utf-8 -*-
#--author--=='cjiang'
##############trans the impute file to tped file ######
############## the impute file ##########
'''
--- rs149630736:45000028:T:C 45000028 T C 1 0 0 1 0 0 1 0 0 1 0 0
--- rs146905936:45000294:G:C 45000294 G C 1 0 0 1 0 0 1 0 0 1 0 0
10 rs1253750 45000220 0 G 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0
'''
#########################################
import os,sys
import re
import time
import optparse
def DNA_complement(sequence):
sequence = sequence.upper()
sequence = sequence.replace('A', 't')
sequence = sequence.replace('T', 'a')
sequence = sequence.replace('C', 'g')
sequenc
#!-*- coding:utf-8 -*-
#--author--=='cjiang'
##############trans the impute file to tped file ######
############## the impute file ##########
'''
--- rs149630736:45000028:T:C 45000028 T C 1 0 0 1 0 0 1 0 0 1 0 0
--- rs146905936:45000294:G:C 45000294 G C 1 0 0 1 0 0 1 0 0 1 0 0
10 rs1253750 45000220 0 G 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 0
'''
#########################################
import os,sys
import re
import time
import optparse
def DNA_complement(sequence):
sequence = sequence.upper()
sequence = sequence.replace('A', 't')
sequence = sequence.replace('T', 'a')
sequence = sequence.replace('C', 'g')
sequenc