EGG_diff <- enrichKEGG(gene = gene_id$ENTREZID, + organism = "hsa",#物种,Homo sapiens (human) + pvalueCutoff = 0.05, + qvalueCutoff = 0.05) Reading KEGG annotation online: "https://rest.kegg.jp/link/hsa/pathway"... Reading KEGG annotation online: "https://rest.kegg.jp/list/pathway/hsa"... --> No gene can be mapped.... --> Expected input gene ID: 641371,9104,51181,2027,5105,5091 --> return NULL... Warning messages: 1: In utils::download.file(url, quiet = TRUE, method = method, ...) : the 'wininet' method is deprecated for http:// and https:// URLs 2: In utils::download.file(url, quiet = TRUE, method = method, ...) : the 'wininet' method is deprecated for http:// and https:// URLs
用clusterProfiler包做KEGG富集,按教程更新了r包及r,怎么还做不出来,求高人指点,谢谢
最新推荐文章于 2023-11-06 16:35:07 发布