huamnn --version # 确认安装,查看版本号(我的是v3.8)
humann_config # 查看服务器中的数据库路径
看到前两个database_folders的最后都是DEMO,如果这样去跑的话就会出现错误
ERROR: You are using the demo ChocoPhlAn database with a non-demo input file. If you have not already done so, please run humann_databases to download the full ChocoPhlAn database. If you have downloaded the full database, use the option --nucleotide-database to provide the location. You can also run humann_config to update the default database location.
wget full = http://huttenhower.sph.harvard.edu/humann_data/chocophlan/full_chocophlan.v201901_v31.tar.gz
(下面的红字填写自己下载上述文件的路径)
humann_config --update database_folders nucleotide /home/user/database