Bcell
epidope -i sample.fna -o sample
Tcell
mhcflurry-predict-scan sample.fasta --alleles HLA-A*02:01 --out sample.csv
相关文献https://openvax.github.io/mhcflurry/
https://openvax.github.io/mhcflurry/commandline_tools.html#mhcflurry-predict-scan
批量处理时候可添加
–results-best {presentation_score,processing_score,affinity,affinity_percentile}
如按照亲和力返回最佳结果 --results-best ‘affinity’