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2019/07/14_NGS Data Analysis Course (Harvard Chan Bioinformatics Core)_5_vim初级
text editor: 可以分为:graphical user interface (GUI) text editors and command-line editors.GUI: such as TextWrangler, Sublime, and Notepad++, which allow you to write and edit plain text documents.vim...原创 2019-07-14 12:09:24 · 238 阅读 · 0 评论 -
2019/07/14_NGS Data Analysis Course (Harvard Chan Bioinformatics Core)_6_shell
#Shell scriptsShell scripts are text files that contain commands we want to run.As with any file, you can give a shell script any name and usually have the extension .sh.用vim 创建一个新的文件:$ v...原创 2019-07-14 14:01:32 · 158 阅读 · 0 评论 -
2019/0715_NGS Data Analysis Course (Harvard Chan Bioinformatics Core)_7_shell permission
Learning ObjectivesHow to grant or restrict access to files on a multi-user UNIX system What is an “Environment Variable” in a shell. What is $PATH, and why I should care.更多permission 标志 https://...翻译 2019-07-15 08:39:55 · 169 阅读 · 0 评论 -
2019/07/16_NGS-Data-Analysis-Course_8_RNA-Seq实验设计
Learning Objectives:Describe the importance of replicates for RNA-seq differential expression experiments Explain the relationship between the number of biological replicates, sequencing depth and ...翻译 2019-07-16 13:24:19 · 332 阅读 · 0 评论 -
2019/07/11_NGS Data Analysis Course (Harvard Chan Bioinformatics Core)
https://github.com/hbctraining/In-depth-NGS-Data-Analysis-Course/tree/master/sessionI Course from GitHub此篇博客只是基础背景介绍Overview of Bioinformatics What is Bioinformatics? The use of computer scienc...原创 2019-07-12 07:06:44 · 240 阅读 · 0 评论 -
2019/07/12_NGS Data Analysis Course (Harvard Chan Bioinformatics Core)_2
UNIX 介绍shell介绍Linux 介绍What is UNIX?Unix is an operating system Easily coordinates the use and sharing of a computer’s (or a system’s) resources and allows multi-user capacity, among other fea...原创 2019-07-12 07:06:07 · 115 阅读 · 0 评论 -
2019/07/12_NGS Data Analysis Course (Harvard Chan Bioinformatics Core)_3
#Introduction to shellhttps://hbctraining.github.io/Intro-to-Shell/lessons/01_the_filesystem.html重要的链接:Information on the shellshell cheat sheets:http://fosswire.com/post/2007/08/unixlinux-c...原创 2019-07-12 08:44:24 · 257 阅读 · 0 评论 -
2019/07/12_NGS Data Analysis Course (Harvard Chan Bioinformatics Core)_4
#Learning objectivesLearn how to search for characters or patterns in a text file using the grep command Learn how to write to file and append to file using output redirection Explore how to use t...原创 2019-07-12 11:14:55 · 164 阅读 · 0 评论 -
2019/07/16_ATAC-Seq_2
https://tobiasrausch.com/courses/atac/ ATAC-Seq tutorialhttps://www.zhihu.com/question/263776928 基础理解https://cloud.tencent.com/developer/article/1346044原创 2019-07-26 08:05:40 · 184 阅读 · 0 评论