Upgrade Bioconductor

最新推荐文章于 2023-11-18 10:37:28 发布

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最新推荐文章于 2023-11-18 10:37:28 发布

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（1）Checking Version of Bioconductor

> source("http://bioconductor.org/biocLite.R")
Bioconductor version 2.14 (BiocInstaller 1.14.3), ?biocLite for help
A newer version of Bioconductor is available for this version of R,
  ?BiocUpgrade for help
> biocLite()
BioC_mirror: http://bioconductor.org
Using Bioconductor version 2.14 (BiocInstaller 1.14.3), R version
  3.1.1.

（2）Upgrade R语言 3.2.2

（3） upgrade Bioconductor
> source("http://bioconductor.org/biocLite.R")
Bioconductor version 3.0 (BiocInstaller 1.16.4), ?biocLite for help
A new version of Bioconductor is available after installing the most recent version of R; see http://bioconductor.org/install
> biocLite("BiocUpgrade")
Error: Bioconductor version 3.0 cannot be upgraded with R version 3.1.0

remove.packages("BiocInstaller") then
  source("http://bioconductor.org/biocLite.R")