df_umap=read.csv("D:/pbmc0001/test2/1.csv",header = F)
lab=read.csv("D:/pbmcbatlab.csv",header = F)
df_umap=t(df_umap)
umap <- umap(df_umap,method='naive',n_neighbors = 5)
head(umap$layout)
str(umap$layout)
str(lab)
View(lab)
View(umap$layout)
umap_df=as.data.frame.array(umap$layout)
labe=unlist(lab)
labe=as.numeric(labe)
df=cbind(umap_df,labe)
View(df)
colnames(df)<- c('X','Y','label')
df=as.data.frame(df)
df$label=factor(df$label)
(ga <- ggplot(df, aes(x = X, y = Y, color = label)) +
geom_point() +
labs(x = "X", y = "Y", color = NULL))
umap降维并使用ggplot绘图
最新推荐文章于 2024-04-30 09:52:49 发布