生信软件安装

软件安装（WSL ubuntu 18.04 LTS）

wget -c https://github.com/samtools/samtools/releases/download/1.9/samtools-1.9.tar.bz2
bunzip2 samtools-1.9.tar.bz2
tar -xvf samtools-1.9.tar
cd samtools-1.9
sudo apt-get install libbz2-dev
sudo apt-get install zlib1g-dev
apt-get install -y liblzma-dev
make
make install
./samtools

 

sudo apt-get install build-essential git-core cmake zlib1g-dev libncurses-dev patch

git clone https://github.com/genome/bam-readcount.git

cd bam-readcount/

cmake -Wno-dev

 

sudo apt install hisat2