用star构建index时出现如下报错:
src/Genome_genomeGenerate.cpp:219:genomeGenerate: exiting because of *OUTPUT FILE* error: could not create output file reference/mouse/STARindex/chrName.txt
SOLUTION: check that the path exists and you have write permission for this file. Also check ulimit -n and increase it to allow more open files.
原因,输出文件夹STARindex需要自己手动建立
建立好之后再重新跑即可
参考about the genomeGenerate error · Issue #676 · alexdobin/STAR (github.com)