GFF3文件按照染色体位置排序

原创 2016年08月28日 23:14:17
#!/usr/bin/env python
# -*- coding: utf-8 -*-

tmp = open('2.txt', 'w')
with open('147389_transcript.fa.gff3', 'r') as f:
    for line in f:
        if '#' not in line:
            line1 = line.strip().split()
            if line1[2] == 'mRNA':
                tmp.write(line.strip() + '\t@\t',)
            if line1[2] == 'exon':
                tmp.write(line.strip() + '\t@\t', )
        elif '###' in line:
            tmp.write('\n', )
tmp.close()


a = []
for l in open('2.txt', 'r'):
    new_l = l.strip().split()
    a.append(new_l)

a.sort(key=lambda x: (x[0], int(x[3]), int(x[4])))

for i in a:
    for m in i:
        if '@' == m:
            print '\n',
        else:
            print m,

输入文件格式


##gff-version   3
# Generated by GMAP version 2016-06-03 using call:  gmapl.avx2 -D /data2/masw_data/ -d NRGenome --trim-end-exons=10 -t 8 --canonical-mode=2 --allow-close-indels=2 -B 5 -f 2 -n 1 --min-trimmed-coverage=0.5 --min-identity=0.90 147389_transcript.fa
chr3D    NRGenome    gene    256151590    256152989    .    -    .    ID=gi|478413622|gb|GAEF01000004.1|.path1;Name=gi|478413622|gb|GAEF01000004.1|
chr3D    NRGenome    mRNA    256151590    256152989    .    -    .    ID=gi|478413622|gb|GAEF01000004.1|.mrna1;Name=gi|478413622|gb|GAEF01000004.1|;Parent=gi|478413622|gb|GAEF01000004.1|.path1;coverage=99.7;identity=97.3;matches=611;mismatches=9;indels=8;unknowns=0
chr3D    NRGenome    exon    256152745    256152989    99    -    .    ID=gi|478413622|gb|GAEF01000004.1|.mrna1.exon1;Name=gi|478413622|gb|GAEF01000004.1|;Parent=gi|478413622|gb|GAEF01000004.1|.mrna1;Target=gi|478413622|gb|GAEF01000004.1| 3 247 +
chr3D    NRGenome    exon    256151590    256151964    96    -    .    ID=gi|478413622|gb|GAEF01000004.1|.mrna1.exon2;Name=gi|478413622|gb|GAEF01000004.1|;Parent=gi|478413622|gb|GAEF01000004.1|.mrna1;Target=gi|478413622|gb|GAEF01000004.1| 248 630 +
chr3D    NRGenome    CDS    256152745    256152988    99    -    0    ID=gi|478413622|gb|GAEF01000004.1|.mrna1.cds1;Name=gi|478413622|gb|GAEF01000004.1|;Parent=gi|478413622|gb|GAEF01000004.1|.mrna1;Target=gi|478413622|gb|GAEF01000004.1| 4 247 +
chr3D    NRGenome    CDS    256151826    256151964    93    -    1    ID=gi|478413622|gb|GAEF01000004.1|.mrna1.cds2;Name=gi|478413622|gb|GAEF01000004.1|;Parent=gi|478413622|gb|GAEF01000004.1|.mrna1;Target=gi|478413622|gb|GAEF01000004.1| 248 393 +
###
chr6B    NRGenome    gene    393753187    393758971    .    +    .    ID=gi|478413624|gb|GAEF01000002.1|.path1;Name=gi|478413624|gb|GAEF01000002.1|
chr6B    NRGenome    mRNA    393753187    393758971    .    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.path1;coverage=100.0;identity=97.2;matches=1041;mismatches=23;indels=7;unknowns=0
chr6B    NRGenome    exon    393753187    393753348    100    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.exon1;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 1 162 +
chr6B    NRGenome    exon    393753915    393754065    98    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.exon2;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 163 313 +
chr6B    NRGenome    exon    393754389    393754500    97    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.exon3;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 314 425 +
chr6B    NRGenome    exon    393754907    393754973    97    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.exon4;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 426 492 +
chr6B    NRGenome    exon    393755046    393755095    98    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.exon5;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 493 542 +
chr6B    NRGenome    exon    393755173    393755233    98    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.exon6;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 543 603 +
chr6B    NRGenome    exon    393757730    393757814    98    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.exon7;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 604 688 +
chr6B    NRGenome    exon    393758596    393758971    95    +    .    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.exon8;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 689 1071 +
chr6B    NRGenome    CDS    393755180    393755233    98    +    0    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.cds1;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 550 603 +
chr6B    NRGenome    CDS    393757730    393757814    98    +    0    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.cds2;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 604 688 +
chr6B    NRGenome    CDS    393758596    393758734    91    +    1    ID=gi|478413624|gb|GAEF01000002.1|.mrna1.cds3;Name=gi|478413624|gb|GAEF01000002.1|;Parent=gi|478413624|gb|GAEF01000002.1|.mrna1;Target=gi|478413624|gb|GAEF01000002.1| 689 834 +
###
chr1B    NRGenome    gene    538352839    538354283    .    +    .    ID=gi|478413623|gb|GAEF01000003.1|.path1;Name=gi|478413623|gb|GAEF01000003.1|
chr1B    NRGenome    mRNA    538352839    538354283    .    +    .    ID=gi|478413623|gb|GAEF01000003.1|.mrna1;Name=gi|478413623|gb|GAEF01000003.1|;Parent=gi|478413623|gb|GAEF01000003.1|.path1;coverage=99.9;identity=95.1;matches=641;mismatches=22;indels=11;unknowns=0
chr1B    NRGenome    exon    538352839    538353126    97    +    .    ID=gi|478413623|gb|GAEF01000003.1|.mrna1.exon1;Name=gi|478413623|gb|GAEF01000003.1|;Parent=gi|478413623|gb|GAEF01000003.1|.mrna1;Target=gi|478413623|gb|GAEF01000003.1| 2 289 +
chr1B    NRGenome    exon    538353906    538354283    93    +    .    ID=gi|478413623|gb|GAEF01000003.1|.mrna1.exon2;Name=gi|478413623|gb|GAEF01000003.1|;Parent=gi|478413623|gb|GAEF01000003.1|.mrna1;Target=gi|478413623|gb|GAEF01000003.1| 290 672 +
chr1B    NRGenome    CDS    538353046    538353126    98    +    0    ID=gi|478413623|gb|GAEF01000003.1|.mrna1.cds1;Name=gi|478413623|gb|GAEF01000003.1|;Parent=gi|478413623|gb|GAEF01000003.1|.mrna1;Target=gi|478413623|gb|GAEF01000003.1| 209 289 +
chr1B    NRGenome    CDS    538353906    538353995    96    +    0    ID=gi|478413623|gb|GAEF01000003.1|.mrna1.cds2;Name=gi|478413623|gb|GAEF01000003.1|;Parent=gi|478413623|gb|GAEF01000003.1|.mrna1;Target=gi|478413623|gb|GAEF01000003.1| 290 379 +
###
chr3D    NRGenome    gene    256154707    256157108    .    -    .    ID=gi|478413625|gb|GAEF01000001.1|.path1;Name=gi|478413625|gb|GAEF01000001.1|
chr3D    NRGenome    mRNA    256154707    256157108    .    -    .    ID=gi|478413625|gb|GAEF01000001.1|.mrna1;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.path1;coverage=100.0;identity=98.7;matches=591;mismatches=8;indels=0;unknowns=0
chr3D    NRGenome    exon    256157043    256157108    100    -    .    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.exon1;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 1 66 +
chr3D    NRGenome    exon    256156361    256156457    100    -    .    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.exon2;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 67 163 +
chr3D    NRGenome    exon    256155580    256155743    96    -    .    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.exon3;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 164 327 +
chr3D    NRGenome    exon    256155344    256155455    99    -    .    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.exon4;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 328 439 +
chr3D    NRGenome    exon    256154872    256154938    100    -    .    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.exon5;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 440 506 +
chr3D    NRGenome    exon    256154707    256154799    97    -    .    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.exon6;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 507 599 +
chr3D    NRGenome    CDS    256155580    256155658    93    -    0    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.cds1;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 249 327 +
chr3D    NRGenome    CDS    256155344    256155455    99    -    1    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.cds2;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 328 439 +
chr3D    NRGenome    CDS    256154914    256154938    100    -    2    ID=gi|478413625|gb|GAEF01000001.1|.mrna1.cds3;Name=gi|478413625|gb|GAEF01000001.1|;Parent=gi|478413625|gb|GAEF01000001.1|.mrna1;Target=gi|478413625|gb|GAEF01000001.1| 440 464 +
###
chr6B    NRGenome    gene    393753187    393755138    .    +    .    ID=gi|478413621|gb|GAEF01000005.1|.path1;Name=gi|478413621|gb|GAEF01000005.1|
chr6B    NRGenome    mRNA    393753187    393755138    .    +    .    ID=gi|478413621|gb|GAEF01000005.1|.mrna1;Name=gi|478413621|gb|GAEF01000005.1|;Parent=gi|478413621|gb|GAEF01000005.1|.path1;coverage=100.0;identity=98.3;matches=575;mismatches=10;indels=0;unknowns=0
chr6B    NRGenome    exon    393753187    393753348    100    +    .    ID=gi|478413621|gb|GAEF01000005.1|.mrna1.exon1;Name=gi|478413621|gb|GAEF01000005.1|;Parent=gi|478413621|gb|GAEF01000005.1|.mrna1;Target=gi|478413621|gb|GAEF01000005.1| 1 162 +
chr6B    NRGenome    exon    393753915    393754065    98    +    .    ID=gi|478413621|gb|GAEF01000005.1|.mrna1.exon2;Name=gi|478413621|gb|GAEF01000005.1|;Parent=gi|478413621|gb|GAEF01000005.1|.mrna1;Target=gi|478413621|gb|GAEF01000005.1| 163 313 +
chr6B    NRGenome    exon    393754389    393754500    97    +    .    ID=gi|478413621|gb|GAEF01000005.1|.mrna1.exon3;Name=gi|478413621|gb|GAEF01000005.1|;Parent=gi|478413621|gb|GAEF01000005.1|.mrna1;Target=gi|478413621|gb|GAEF01000005.1| 314 425 +
chr6B    NRGenome    exon    393754907    393754973    97    +    .    ID=gi|478413621|gb|GAEF01000005.1|.mrna1.exon4;Name=gi|478413621|gb|GAEF01000005.1|;Parent=gi|478413621|gb|GAEF01000005.1|.mrna1;Target=gi|478413621|gb|GAEF01000005.1| 426 492 +
chr6B    NRGenome    exon    393755046    393755138    97    +    .    ID=gi|478413621|gb|GAEF01000005.1|.mrna1.exon5;Name=gi|478413621|gb|GAEF01000005.1|;Parent=gi|478413621|gb|GAEF01000005.1|.mrna1;Target=gi|478413621|gb|GAEF01000005.1| 493 585 +
chr6B    NRGenome    CDS    393753187    393753348    100    +    0    ID=gi|478413621|gb|GAEF01000005.1|.mrna1.cds1;Name=gi|478413621|gb|GAEF01000005.1|;Parent=gi|478413621|gb|GAEF01000005.1|.mrna1;Target=gi|478413621|gb|GAEF01000005.1| 1 162 +
chr6B    NRGenome    CDS    393753915    393753932    100    +    0    ID=gi|478413621|gb|GAEF01000005.1|.mrna1.cds2;Name=gi|478413621|gb|GAEF01000005.1|;Parent=gi|478413621|gb|GAEF01000005.1|.mrna1;Target=gi|478413621|gb|GAEF01000005.1| 163 180 +
###
chr3D    NRGenome    gene    256151590    256157108    .    -    .    ID=gi|478413615|gb|GAEF01000011.1|.path1;Name=gi|478413615|gb|GAEF01000011.1|
chr3D    NRGenome    mRNA    256151590    256157108    .    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.path1;coverage=100.0;identity=97.9;matches=1219;mismatches=17;indels=9;unknowns=0
chr3D    NRGenome    exon    256157043    256157108    100    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon1;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 1 66 +
chr3D    NRGenome    exon    256156361    256156457    100    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon2;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 67 163 +
chr3D    NRGenome    exon    256155580    256155743    96    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon3;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 164 327 +
chr3D    NRGenome    exon    256155344    256155455    99    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon4;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 328 439 +
chr3D    NRGenome    exon    256154872    256154938    100    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon5;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 440 506 +
chr3D    NRGenome    exon    256154750    256154799    96    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon6;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 507 556 +
chr3D    NRGenome    exon    256154612    256154672    96    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon7;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 557 618 +
chr3D    NRGenome    exon    256153659    256153817    99    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon8;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 619 777 +
chr3D    NRGenome    exon    256152745    256152829    100    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon9;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 778 862 +
chr3D    NRGenome    exon    256151590    256151964    96    -    .    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.exon10;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 863 1245 +
chr3D    NRGenome    CDS    256153659    256153801    99    -    0    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.cds1;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 635 777 +
chr3D    NRGenome    CDS    256152745    256152829    100    -    2    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.cds2;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 778 862 +
chr3D    NRGenome    CDS    256151875    256151964    98    -    0    ID=gi|478413615|gb|GAEF01000011.1|.mrna1.cds3;Name=gi|478413615|gb|GAEF01000011.1|;Parent=gi|478413615|gb|GAEF01000011.1|.mrna1;Target=gi|478413615|gb|GAEF01000011.1| 863 952 +
###
chr6B    NRGenome    gene    393753187    393758971    .    +    .    ID=gi|478413613|gb|GAEF01000013.1|.path1;Name=gi|478413613|gb|GAEF01000013.1|
chr6B    NRGenome    mRNA    393753187    393758971    .    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.path1;coverage=100.0;identity=95.3;matches=1222;mismatches=44;indels=16;unknowns=0
chr6B    NRGenome    exon    393753187    393753348    100    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon1;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 1 162 +
chr6B    NRGenome    exon    393753915    393754065    98    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon2;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 163 313 +
chr6B    NRGenome    exon    393754389    393754500    97    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon3;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 314 425 +
chr6B    NRGenome    exon    393754907    393754973    97    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon4;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 426 492 +
chr6B    NRGenome    exon    393755046    393755095    98    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon5;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 493 542 +
chr6B    NRGenome    exon    393755173    393755233    96    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon6;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 543 604 +
chr6B    NRGenome    exon    393756026    393756174    82    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon7;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 605 749 +
chr6B    NRGenome    exon    393756704    393756710    100    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon8;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 752 758 +
chr6B    NRGenome    exon    393757678    393757814    97    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon9;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 762 898 +
chr6B    NRGenome    exon    393758596    393758971    95    +    .    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.exon10;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 899 1281 +
chr6B    NRGenome    CDS    393756042    393756156    87    +    0    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.cds1;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 621 737 +
chr6B    NRGenome    CDS    393756163    393756174    72    +    0    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.cds2;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 738 749 +
chr6B    NRGenome    CDS    393756701    393756701    0    +    0    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.cds3;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 750 751 +
chr6B    NRGenome    CDS    393756704    393756710    100    +    2    ID=gi|478413613|gb|GAEF01000013.1|.mrna1.cds4;Name=gi|478413613|gb|GAEF01000013.1|;Parent=gi|478413613|gb|GAEF01000013.1|.mrna1;Target=gi|478413613|gb|GAEF01000013.1| 752 758 +
###
chr3D    NRGenome    gene    256151590    256157108    .    -    .    ID=gi|478413619|gb|GAEF01000007.1|.path1;Name=gi|478413619|gb|GAEF01000007.1|
chr3D    NRGenome    mRNA    256151590    256157108    .    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.path1;coverage=100.0;identity=97.7;matches=1060;mismatches=17;indels=8;unknowns=0
chr3D    NRGenome    exon    256157043    256157108    100    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon1;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 1 66 +
chr3D    NRGenome    exon    256156361    256156457    100    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon2;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 67 163 +
chr3D    NRGenome    exon    256155580    256155743    96    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon3;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 164 327 +
chr3D    NRGenome    exon    256155344    256155455    99    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon4;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 328 439 +
chr3D    NRGenome    exon    256154872    256154938    100    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon5;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 440 506 +
chr3D    NRGenome    exon    256154750    256154799    96    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon6;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 507 556 +
chr3D    NRGenome    exon    256154612    256154672    98    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon7;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 557 617 +
chr3D    NRGenome    exon    256152745    256152829    98    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon8;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 618 702 +
chr3D    NRGenome    exon    256151590    256151964    96    -    .    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.exon9;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 703 1085 +
chr3D    NRGenome    CDS    256154612    256154665    98    -    0    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.cds1;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 564 617 +
chr3D    NRGenome    CDS    256152745    256152829    98    -    0    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.cds2;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 618 702 +
chr3D    NRGenome    CDS    256151826    256151964    93    -    1    ID=gi|478413619|gb|GAEF01000007.1|.mrna1.cds3;Name=gi|478413619|gb|GAEF01000007.1|;Parent=gi|478413619|gb|GAEF01000007.1|.mrna1;Target=gi|478413619|gb|GAEF01000007.1| 703 848 +
###
chr7D    NRGenome    gene    535262989    535268779    .    +    .    ID=gi|478413610|gb|GAEF01000016.1|.path1;Name=gi|478413610|gb|GAEF01000016.1|
chr7D    NRGenome    mRNA    535262989    535268779    .    +    .    ID=gi|478413610|gb|GAEF01000016.1|.mrna1;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.path1;coverage=100.0;identity=98.5;matches=902;mismatches=14;indels=0;unknowns=0
chr7D    NRGenome    exon    535262989    535263238    98    +    .    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.exon1;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 1 250 +
chr7D    NRGenome    exon    535263332    535263418    98    +    .    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.exon2;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 251 337 +
chr7D    NRGenome    exon    535263499    535263611    100    +    .    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.exon3;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 338 450 +
chr7D    NRGenome    exon    535264951    535265057    98    +    .    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.exon4;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 451 557 +
chr7D    NRGenome    exon    535265523    535265628    100    +    .    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.exon5;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 558 663 +
chr7D    NRGenome    exon    535267736    535267807    100    +    .    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.exon6;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 664 735 +
chr7D    NRGenome    exon    535268599    535268779    96    +    .    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.exon7;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 736 916 +
chr7D    NRGenome    CDS    535262990    535263238    98    +    0    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.cds1;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 2 250 +
chr7D    NRGenome    CDS    535263332    535263418    98    +    0    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.cds2;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 251 337 +
chr7D    NRGenome    CDS    535263499    535263611    100    +    0    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.cds3;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 338 450 +
chr7D    NRGenome    CDS    535264951    535265057    98    +    2    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.cds4;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 451 557 +
chr7D    NRGenome    CDS    535265523    535265563    100    +    1    ID=gi|478413610|gb|GAEF01000016.1|.mrna1.cds5;Name=gi|478413610|gb|GAEF01000016.1|;Parent=gi|478413610|gb|GAEF01000016.1|.mrna1;Target=gi|478413610|gb|GAEF01000016.1| 558 598 +
###
chr3D    NRGenome    gene    256151590    256155732    .    -    .    ID=gi|478413616|gb|GAEF01000010.1|.path1;Name=gi|478413616|gb|GAEF01000010.1|
chr3D    NRGenome    mRNA    256151590    256155732    .    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.path1;coverage=87.0;identity=97.6;matches=1045;mismatches=17;indels=9;unknowns=0
chr3D    NRGenome    exon    256155580    256155732    96    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.exon1;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 161 313 +
chr3D    NRGenome    exon    256155344    256155455    99    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.exon2;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 314 425 +
chr3D    NRGenome    exon    256154872    256154938    100    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.exon3;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 426 492 +
chr3D    NRGenome    exon    256154750    256154799    96    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.exon4;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 493 542 +
chr3D    NRGenome    exon    256154612    256154672    96    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.exon5;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 543 604 +
chr3D    NRGenome    exon    256153659    256153817    99    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.exon6;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 605 763 +
chr3D    NRGenome    exon    256152745    256152829    100    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.exon7;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 764 848 +
chr3D    NRGenome    exon    256151590    256151964    96    -    .    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.exon8;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 849 1231 +
chr3D    NRGenome    CDS    256153659    256153801    99    -    0    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.cds1;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 621 763 +
chr3D    NRGenome    CDS    256152745    256152829    100    -    2    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.cds2;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 764 848 +
chr3D    NRGenome    CDS    256151875    256151964    98    -    0    ID=gi|478413616|gb|GAEF01000010.1|.mrna1.cds3;Name=gi|478413616|gb|GAEF01000010.1|;Parent=gi|478413616|gb|GAEF01000010.1|.mrna1;Target=gi|478413616|gb|GAEF01000010.1| 849 938 +
###
chr7D    NRGenome    gene    535263188    535268869    .    +    .    ID=gi|478413608|gb|GAEF01000018.1|.path1;Name=gi|478413608|gb|GAEF01000018.1|
chr7D    NRGenome    mRNA    535263188    535268869    .    +    .    ID=gi|478413608|gb|GAEF01000018.1|.mrna1;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.path1;coverage=100.0;identity=98.2;matches=816;mismatches=12;indels=3;unknowns=0
chr7D    NRGenome    exon    535263188    535263238    100    +    .    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.exon1;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 1 51 +
chr7D    NRGenome    exon    535263332    535263418    94    +    .    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.exon2;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 52 135 +
chr7D    NRGenome    exon    535263499    535263611    98    +    .    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.exon3;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 136 248 +
chr7D    NRGenome    exon    535264951    535265057    98    +    .    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.exon4;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 249 355 +
chr7D    NRGenome    exon    535265523    535265628    100    +    .    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.exon5;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 356 461 +
chr7D    NRGenome    exon    535267736    535267807    100    +    .    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.exon6;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 462 533 +
chr7D    NRGenome    exon    535268575    535268869    97    +    .    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.exon7;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 534 828 +
chr7D    NRGenome    CDS    535263188    535263238    100    +    0    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.cds1;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 1 51 +
chr7D    NRGenome    CDS    535263332    535263400    97    +    0    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.cds2;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 52 120 +
chr7D    NRGenome    CDS    535263404    535263418    100    +    0    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.cds3;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 121 135 +
chr7D    NRGenome    CDS    535263499    535263611    98    +    0    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.cds4;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 136 248 +
chr7D    NRGenome    CDS    535264951    535265057    98    +    2    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.cds5;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 249 355 +
chr7D    NRGenome    CDS    535265523    535265563    100    +    1    ID=gi|478413608|gb|GAEF01000018.1|.mrna1.cds6;Name=gi|478413608|gb|GAEF01000018.1|;Parent=gi|478413608|gb|GAEF01000018.1|.mrna1;Target=gi|478413608|gb|GAEF01000018.1| 356 396 +
###
chr7D    NRGenome    gene    535263188    535268869    .    +    .    ID=gi|478413607|gb|GAEF01000019.1|.path1;Name=gi|478413607|gb|GAEF01000019.1|
chr7D    NRGenome    mRNA    535263188    535268869    .    +    .    ID=gi|478413607|gb|GAEF01000019.1|.mrna1;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.path1;coverage=100.0;identity=98.2;matches=838;mismatches=12;indels=3;unknowns=0
chr7D    NRGenome    exon    535263188    535263238    100    +    .    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.exon1;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 1 51 +
chr7D    NRGenome    exon    535263332    535263418    94    +    .    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.exon2;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 52 135 +
chr7D    NRGenome    exon    535263499    535263611    98    +    .    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.exon3;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 136 248 +
chr7D    NRGenome    exon    535264951    535265079    98    +    .    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.exon4;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 249 377 +
chr7D    NRGenome    exon    535265523    535265628    100    +    .    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.exon5;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 378 483 +
chr7D    NRGenome    exon    535267736    535267807    100    +    .    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.exon6;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 484 555 +
chr7D    NRGenome    exon    535268575    535268869    97    +    .    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.exon7;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 556 850 +
chr7D    NRGenome    CDS    535263188    535263238    100    +    0    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.cds1;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 1 51 +
chr7D    NRGenome    CDS    535263332    535263400    97    +    0    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.cds2;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 52 120 +
chr7D    NRGenome    CDS    535263404    535263418    100    +    0    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.cds3;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 121 135 +
chr7D    NRGenome    CDS    535263499    535263611    98    +    0    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.cds4;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 136 248 +
chr7D    NRGenome    CDS    535264951    535265079    98    +    2    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.cds5;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 249 377 +
chr7D    NRGenome    CDS    535265523    535265628    100    +    2    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.cds6;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 378 483 +
chr7D    NRGenome    CDS    535267736    535267807    100    +    0    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.cds7;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 484 555 +
chr7D    NRGenome    CDS    535268575    535268718    97    +    0    ID=gi|478413607|gb|GAEF01000019.1|.mrna1.cds8;Name=gi|478413607|gb|GAEF01000019.1|;Parent=gi|478413607|gb|GAEF01000019.1|.mrna1;Target=gi|478413607|gb|GAEF01000019.1| 556 699 +
###
chr7B    NRGenome    gene    575340591    575347033    .    +    .    ID=gi|478413605|gb|GAEF01000021.1|.path1;Name=gi|478413605|gb|GAEF01000021.1|
chr7B    NRGenome    mRNA    575340591    575347033    .    +    .    ID=gi|478413605|gb|GAEF01000021.1|.mrna1;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.path1;coverage=100.0;identity=97.7;matches=1200;mismatches=20;indels=8;unknowns=0
chr7B    NRGenome    exon    575340591    575340840    96    +    .    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.exon1;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 1 250 +
chr7B    NRGenome    exon    575340932    575341015    93    +    .    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.exon2;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 251 337 +
chr7B    NRGenome    exon    575341096    575341208    96    +    .    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.exon3;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 338 450 +
chr7B    NRGenome    exon    575342841    575342947    100    +    .    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.exon4;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 451 557 +
chr7B    NRGenome    exon    575343419    575343524    100    +    .    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.exon5;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 558 663 +
chr7B    NRGenome    exon    575345725    575345796    97    +    .    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.exon6;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 664 735 +
chr7B    NRGenome    exon    575346543    575347033    98    +    .    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.exon7;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 736 1225 +
chr7B    NRGenome    CDS    575340592    575340840    96    +    0    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.cds1;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 2 250 +
chr7B    NRGenome    CDS    575340932    575341015    93    +    0    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.cds2;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 251 337 +
chr7B    NRGenome    CDS    575341096    575341208    96    +    0    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.cds3;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 338 450 +
chr7B    NRGenome    CDS    575342841    575342947    100    +    2    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.cds4;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 451 557 +
chr7B    NRGenome    CDS    575343419    575343459    100    +    1    ID=gi|478413605|gb|GAEF01000021.1|.mrna1.cds5;Name=gi|478413605|gb|GAEF01000021.1|;Parent=gi|478413605|gb|GAEF01000021.1|.mrna1;Target=gi|478413605|gb|GAEF01000021.1| 558 598 +
###
chr7D    NRGenome    gene    535262989    535269063    .    +    .    ID=gi|478413606|gb|GAEF01000020.1|.path1;Name=gi|478413606|gb|GAEF01000020.1|
chr7D    NRGenome    mRNA    535262989    535269063    .    +    .    ID=gi|478413606|gb|GAEF01000020.1|.mrna1;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.path1;coverage=100.0;identity=98.6;matches=1228;mismatches=18;indels=0;unknowns=0
chr7D    NRGenome    exon    535262989    535263238    98    +    .    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.exon1;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 1 250 +
chr7D    NRGenome    exon    535263332    535263418    98    +    .    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.exon2;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 251 337 +
chr7D    NRGenome    exon    535263499    535263611    100    +    .    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.exon3;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 338 450 +
chr7D    NRGenome    exon    535264951    535265079    98    +    .    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.exon4;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 451 579 +
chr7D    NRGenome    exon    535265523    535265628    100    +    .    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.exon5;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 580 685 +
chr7D    NRGenome    exon    535267736    535267807    100    +    .    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.exon6;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 686 757 +
chr7D    NRGenome    exon    535268575    535269063    97    +    .    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.exon7;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 758 1246 +
chr7D    NRGenome    CDS    535262990    535263238    98    +    0    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.cds1;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 2 250 +
chr7D    NRGenome    CDS    535263332    535263418    98    +    0    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.cds2;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 251 337 +
chr7D    NRGenome    CDS    535263499    535263611    100    +    0    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.cds3;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 338 450 +
chr7D    NRGenome    CDS    535264951    535265079    98    +    2    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.cds4;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 451 579 +
chr7D    NRGenome    CDS    535265523    535265628    100    +    2    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.cds5;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 580 685 +
chr7D    NRGenome    CDS    535267736    535267807    100    +    0    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.cds6;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 686 757 +
chr7D    NRGenome    CDS    535268575    535268718    98    +    0    ID=gi|478413606|gb|GAEF01000020.1|.mrna1.cds7;Name=gi|478413606|gb|GAEF01000020.1|;Parent=gi|478413606|gb|GAEF01000020.1|.mrna1;Target=gi|478413606|gb|GAEF01000020.1| 758 901 +
###
chr6A    NRGenome    gene    388054802    388058958    .    +    .    ID=gi|478413618|gb|GAEF01000008.1|.path1;Name=gi|478413618|gb|GAEF01000008.1|
chr6A    NRGenome    mRNA    388054802    388058958    .    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.path1;coverage=90.6;identity=97.3;matches=610;mismatches=13;indels=4;unknowns=0
chr6A    NRGenome    exon    388054802    388054867    100    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.exon1;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 1 66 +
chr6A    NRGenome    exon    388055205    388055301    96    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.exon2;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 67 163 +
chr6A    NRGenome    exon    388056090    388056253    98    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.exon3;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 164 327 +
chr6A    NRGenome    exon    388056378    388056489    97    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.exon4;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 328 442 +
chr6A    NRGenome    exon    388056894    388056960    100    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.exon5;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 443 509 +
chr6A    NRGenome    exon    388057033    388057082    98    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.exon6;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 510 559 +
chr6A    NRGenome    exon    388057160    388057221    87    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.exon7;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 560 620 +
chr6A    NRGenome    exon    388058953    388058958    100    +    .    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.exon8;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 621 626 +
chr6A    NRGenome    CDS    388056137    388056217    97    +    0    ID=gi|478413618|gb|GAEF01000008.1|.mrna1.cds1;Name=gi|478413618|gb|GAEF01000008.1|;Parent=gi|478413618|gb|GAEF01000008.1|.mrna1;Target=gi|478413618|gb|GAEF01000008.1| 211 291 +
###
chr1D    NRGenome    gene    367156652    367158394    .    +    .    ID=gi|478413603|gb|GAEF01000023.1|.path1;Name=gi|478413603|gb|GAEF01000023.1|
chr1D    NRGenome    mRNA    367156652    367158394    .    +    .    ID=gi|478413603|gb|GAEF01000023.1|.mrna1;Name=gi|478413603|gb|GAEF01000023.1|;Parent=gi|478413603|gb|GAEF01000023.1|.path1;coverage=100.0;identity=99.7;matches=1373;mismatches=4;indels=0;unknowns=0
chr1D    NRGenome    exon    367156652    367157528    99    +    .    ID=gi|478413603|gb|GAEF01000023.1|.mrna1.exon1;Name=gi|478413603|gb|GAEF01000023.1|;Parent=gi|478413603|gb|GAEF01000023.1|.mrna1;Target=gi|478413603|gb|GAEF01000023.1| 1 877 +
chr1D    NRGenome    exon    367157816    367157944    100    +    .    ID=gi|478413603|gb|GAEF01000023.1|.mrna1.exon2;Name=gi|478413603|gb|GAEF01000023.1|;Parent=gi|478413603|gb|GAEF01000023.1|.mrna1;Target=gi|478413603|gb|GAEF01000023.1| 878 1006 +
chr1D    NRGenome    exon    367158024    367158394    99    +    .    ID=gi|478413603|gb|GAEF01000023.1|.mrna1.exon3;Name=gi|478413603|gb|GAEF01000023.1|;Parent=gi|478413603|gb|GAEF01000023.1|.mrna1;Target=gi|478413603|gb|GAEF01000023.1| 1007 1377 +
chr1D    NRGenome    CDS    367157867    367157944    100    +    0    ID=gi|478413603|gb|GAEF01000023.1|.mrna1.cds1;Name=gi|478413603|gb|GAEF01000023.1|;Parent=gi|478413603|gb|GAEF01000023.1|.mrna1;Target=gi|478413603|gb|GAEF01000023.1| 929 1006 +
chr1D    NRGenome    CDS    367158024    367158200    100    +    0    ID=gi|478413603|gb|GAEF01000023.1|.mrna1.cds2;Name=gi|478413603|gb|GAEF01000023.1|;Parent=gi|478413603|gb|GAEF01000023.1|.mrna1;Target=gi|478413603|gb|GAEF01000023.1| 1007 1183 +
###
chr1D    NRGenome    gene    367153309    367158394    .    +    .    ID=gi|478413604|gb|GAEF01000022.1|.path1;Name=gi|478413604|gb|GAEF01000022.1|
chr1D    NRGenome    mRNA    367153309    367158394    .    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.path1;coverage=100.0;identity=99.2;matches=962;mismatches=8;indels=0;unknowns=0
chr1D    NRGenome    exon    367153309    367153331    100    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.exon1;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 1 23 +
chr1D    NRGenome    exon    367153599    367153663    100    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.exon2;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 24 88 +
chr1D    NRGenome    exon    367153744    367153893    99    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.exon3;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 89 238 +
chr1D    NRGenome    exon    367155373    367155426    96    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.exon4;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 239 292 +
chr1D    NRGenome    exon    367156563    367156662    98    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.exon5;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 293 392 +
chr1D    NRGenome    exon    367157451    367157528    100    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.exon6;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 393 470 +
chr1D    NRGenome    exon    367157816    367157944    100    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.exon7;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 471 599 +
chr1D    NRGenome    exon    367158024    367158394    99    +    .    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.exon8;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 600 970 +
chr1D    NRGenome    CDS    367157867    367157944    100    +    0    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.cds1;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 522 599 +
chr1D    NRGenome    CDS    367158024    367158200    100    +    0    ID=gi|478413604|gb|GAEF01000022.1|.mrna1.cds2;Name=gi|478413604|gb|GAEF01000022.1|;Parent=gi|478413604|gb|GAEF01000022.1|.mrna1;Target=gi|478413604|gb|GAEF01000022.1| 600 776 +
###
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