最近用cybersort 分析细胞出现“$ operator is invalid for atomic vectors"错误,快放弃时,看到一个帖子说是缺少e1071包,安装以后,报错解决
CIBERSORT(LM22.file,testfile, perm = 1000, QN = F)
Error in out[[t]]$coefs : $ operator is invalid for atomic vectors
In addition: Warning message:
In parallel::mclapply(1:svn_itor, res, mc.cores = svn_itor) :
all scheduled cores encountered errors in user code
安装e1071包后运行正常
> install.packages("e1071")
also installing the dependency ‘proxy’
trying URL 'https://mirror.lzu.edu.cn/CRAN/bin/macosx/big-sur-x86_64/contrib/4.3/proxy_0.4-27.tgz'
Content type 'application/octet-stream' length 200919 bytes (196 KB)
==================================================
downloaded 196 KB
>CIBERSORT(LM22.file,testfile, perm = 1000, QN = F)