求助帖 #DEseq2安装出错

kukuxuedaima

于 2024-03-31 17:18:04 发布

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#DEseq2安装出错

请问为什么输入这段代码：

if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")

BiocManager::install("DESeq2")

之后还是一直报错：

'getOption("repos")' replaces Bioconductor standard repositories, see
'help("repositories", package = "BiocManager")' for details.
Replacement repositories:
    CRAN: https://mirror.lzu.edu.cn/CRAN/
Bioconductor version 3.18 (BiocManager 1.30.22), R 4.3.3 (2024-02-29 ucrt)
Installing package(s) 'DESeq2'
还安装相依关系‘bitops’, ‘formatR’, ‘colorspace’, ‘utf8’, ‘RCurl’, ‘GenomeInfoDbData’, ‘zlibbioc’, ‘abind’, ‘crayon’, ‘SparseArray’, ‘lambda.r’, ‘futile.options’, ‘farver’, ‘labeling’, ‘munsell’, ‘R6’, ‘RColorBrewer’, ‘viridisLite’, ‘fansi’, ‘magrittr’, ‘pillar’, ‘pkgconfig’, ‘GenomeInfoDb’, ‘XVector’, ‘S4Arrays’, ‘DelayedArray’, ‘futile.logger’, ‘snow’, ‘BH’, ‘cli’, ‘glue’, ‘gtable’, ‘isoband’, ‘lifecycle’, ‘rlang’, ‘scales’, ‘tibble’, ‘vctrs’, ‘withr’, ‘S4Vectors’, ‘IRanges’, ‘GenomicRanges’, ‘SummarizedExperiment’, ‘BiocGenerics��, ‘Biobase’, ‘BiocParallel’, ‘matrixStats’, ‘locfit’, ‘ggplot2’, ‘Rcpp’, ‘MatrixGenerics’, ‘RcppArmadillo’

试开URL’https://mirror.lzu.edu.cn/CRAN/bin/windows/contrib/4.3/bitops_1.0-7.zip'
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